NAIK Genome Database

experiment name	hs_Squamouscellcarcinom_SCC9_undef_CHD4_SRX2741420	number of peaks	20887
antibody	CHD4
cell line	SCC9	Number of reads	23153400
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
FOS	1944
FOSL2	1434
BATF::JUN	1422
JUND	1398
FOSL1	1320
FOS::JUN	1203
JUN	1186
SP1	1059
Atf3	1046
CEBPB	998
ERG	937
RUNX1	851
PBX1	845
MYCN	783
Gabpa	769
CTCF	764
MYC	760
NR2F1	741
ELF1	724
Esrrg	705
CEBPA	670
ZBTB7A	655
NFIC	626
E2F4	624
TAL1::TCF3	622
STAT3	616
E2F1	609
Tcf12	604
ZNF740	601
TFAP2A	586
ELK1	576
MAX	549
TCF4	531
EGR1	517
TCF3	505
ETS1	487
TFAP2C	484
FOXA1	471
Sox2	465
TEAD4	459
MYBL1	425
NFE2	400
TFAP2A-var.2	390
JUNB	388
KLF4	386
EGR2	380
TEAD1	377
Nfe2l2	368
CEBPD	358
NFKB1	341
Esrra	332
Foxa2	329
ETV1	323
Tcf21	320
RUNX3	317
KLF5	317
Rxra	312
Pparg::Rxra	311
MAX::MYC	308
Ar	306
FLI1	303
REL	303
ZEB1	302
RELA	301
ELF3	300
ELK4	277
RUNX2	276
NR1H2::RXRA	275
GATA3	274
MAF::NFE2	266
YY1	263
ETV6	253
NRF1	253
TFAP4	251
USF2	250
Gata1	247
Hnf4a	245
SPI1	243
USF1	242
E2F6	239
GATA2	239
TP63	234
BHLHE40	229
MAFF	227
Gata4	212
ERF	206
EBF1	203
SP3	202
ELK3	196
MAFG	195
ZNF263	190
TFDP1	190
NFKB2	185
BHLHE41	183
ETV3	182
HEY1	182
SOX9	179
MAFK	176
KLF9	173
STAT1::STAT2	173
GATA5	168
Bach1::Mafk	164
TFAP2A-var.3	164
Klf1	157
NFIA	157
Foxo1	156
NR3C2	148
OTX2	141
Foxj2	134
CREB1	132
TCF7L2	132
Atf1	128
PAX5	113
NEUROD1	108
Hand1::Tcf3	106
SMAD2::SMAD3::SMAD4	106
Tcf7	105
Mafb	105
HSF1	105
Arnt	104
CDX2	100
SP2	99
THAP1	97
Nr1h3::Rxra	96
ATF4	96
E2F3	93
POU5F1B	92
NFATC3	89
NFYA	88
Stat5a::Stat5b	87
Ddit3::Cebpa	86
NFIL3	84
FEV	83
MEF2B	83
SP4	83
ARNT::HIF1A	81
NFYB	81
Arid3a	80
GATA1::TAL1	79
EGR4	77
MYB	77
PRDM1	75
RARA::RXRA	75
NKX3-2	72
HNF4G	70
ETV4	67
MEF2A	64
FOXP1	64
STAT1	64
BATF3	63
PDX1	62
Ahr::Arnt	60
RXRB	60
NR4A2	59
ZBTB33	56
ZNF143	54
Pou5f1::Sox2	54
RXRG	52
MAFG::NFE2L1	51
TEAD2	45
XBP1	45
BCL6B	45
Arntl	44
TP73	42
Bcl6	40
IRF1	40
NFATC1	39
EOMES	39
TP53	39
Hic1;	38
Gfi1b	36
KLF13	36
EGR3	35
HNF1B	34
SPIB	34
TBX1	33
Gmeb1	32
MYBL2	32
Dux	30
Vdr	30
Nkx3-1	29
FOXH1	28
SNAI2	28
NR3C1	28
SRF	27
HINFP	25
CREB3L1	24
GMEB2	22
ELF5	22
SCRT1	22
DUX4	21
ZBTB18	20
FOXP3	20
REST	19
SREBF1	18
MEF2D	17
NR2C2	17
Rarg	17
MEIS1	17
RFX5	17
Sox17	16
POU2F2	13
PPARG	12
CLOCK	11
GRHL1	11
Nr5a2	9
CREB3	9
Mecom	9
SREBF2	9
RXRA::VDR	9
TBX19	8
HNF1A	8
HOXA13	7
RORA(var.2)	7
BARX1	7
Rarb	7
Ascl2	7
LEF1	7
Pax6	6
PROX1	5
Creb3l2	5
GLI2	5
SMAD3	4
FOS::JUNB	4
FOXO4	4
Hes1	4
MIXL1	4
Arx	3
Srebf1(var.2)	3
RARA	3
Rfx1	3
FOS::JUND	3
Pitx1	3
IRF2	3
DBP	2
RFX2	2
HSF2	2
TFE3	2
E2F8	2
Hoxa9	2
Alx4	1
HES5	1
TFEB	1
Stat4	1
FOS::JUN(var.2)	1
Hoxa11	1
NFAT5	1
HOXA5	1
Id2	1
RORA	1

Motif name

Number of overlap

1944

1434

1422

1398

1320