NAIK Genome Database

experiment name	hs_BreastAdenocarcinoma_MCF7_cancer_RAD21_SRX1165105	number of peaks	68321
antibody	RAD21
cell line	MCF7	Number of reads	13285532
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	13896
MYC	3849
MYCN	3226
Tcf12	2785
SP1	2303
TCF4	2237
ZEB1	1913
NFIC	1855
TAL1::TCF3	1828
NR2F1	1700
TCF3	1457
FOXA1	1247
TFAP2C	1207
TFAP2A	1105
ZBTB7A	1084
MYBL1	1077
STAT3	1074
Sox2	1037
E2F4	1017
ERG	1001
RUNX1	982
MAX	980
Gabpa	967
RUNX3	923
ELF1	901
ZNF740	887
Foxa2	871
FOS	854
TEAD4	838
E2F1	805
TFAP2A-var.2	805
Esrrg	805
GATA3	730
MAX::MYC	724
FOSL2	723
EGR1	695
YY1	666
BHLHE41	650
Esrra	633
JUND	612
NR1H2::RXRA	607
BATF::JUN	606
EGR2	605
ELK1	599
FOSL1	570
TFAP4	541
Ar	540
Gata1	530
Rxra	528
Atf3	518
Pparg::Rxra	514
PBX1	504
KLF4	501
JUN	499
TEAD1	489
CEBPB	474
NEUROD1	464
FOS::JUN	460
Gata4	446
ZNF263	419
NFKB1	415
USF1	409
USF2	400
KLF5	399
GATA2	396
Nr1h3::Rxra	391
Hnf4a	381
EBF1	375
Arid3a	368
OTX2	359
ETS1	347
SOX9	344
Tcf21	343
TFAP2A-var.3	339
NFIA	339
E2F6	331
Foxj2	315
GATA5	315
BHLHE40	313
THAP1	313
CEBPA	311
NRF1	310
ELF3	290
CEBPD	284
NKX3-2	272
PAX5	261
TCF7L2	260
STAT1::STAT2	260
ETV1	257
E2F3	246
SMAD2::SMAD3::SMAD4	238
SPI1	234
REL	231
RELA	229
Tcf7	224
MAFK	219
Arnt	210
FLI1	203
Klf1	197
Mafb	193
POU5F1B	184
TP63	183
Pou5f1::Sox2	178
SP4	175
ELK4	175
PDX1	173
NFE2	172
NFKB2	171
Foxo1	171
MYBL2	169
CREB1	168
Hand1::Tcf3	168
ETV6	164
Nfe2l2	162
RUNX2	162
MAFF	160
KLF9	160
ARNT::HIF1A	156
SP3	153
HNF4G	152
FOXP1	149
CDX2	149
Bach1::Mafk	148
JUNB	148
RARA::RXRA	147
HEY1	143
TFDP1	142
EOMES	140
TEAD2	139
ERF	139
HSF1	136
MAF::NFE2	135
ETV3	134
Nkx3-1	127
STAT1	124
Atf1	115
Ahr::Arnt	114
MAFG	113
GATA1::TAL1	111
ELK3	110
Vdr	105
MYB	105
NR3C2	100
BCL6B	100
SNAI2	89
MEF2B	87
TP53	87
Bcl6	87
NFIL3	82
Stat5a::Stat5b	81
ZNF143	80
GRHL1	77
NFATC3	75
EGR4	74
MEF2A	74
FEV	73
KLF13	71
Gfi1b	70
SP2	66
BATF3	62
NFYB	61
ATF4	60
SCRT1	60
PRDM1	60
NR4A2	59
ZBTB18	57
POU2F2	56
TBX1	55
Hic1;	54
SRF	53
IRF1	52
NFYA	51
Ddit3::Cebpa	50
HINFP	50
FOXP3	48
ELF5	44
REST	44
FOXH1	43
RFX5	39
RXRG	39
XBP1	37
PPARG	36
SPIB	36
RXRB	35
EGR3	34
Dux	33
NFATC1	27
SREBF2	27
NR3C1	25
Arntl	25
Gmeb1	24
Sox17	23
NR2C2	23
HNF1B	23
ETV4	22
TP73	22
GLI2	22
DUX4	22
Mecom	21
Ascl2	20
FOS::JUND	20
RXRA::VDR	20
MAFG::NFE2L1	19
GMEB2	18
Rarg	18
Nr5a2	17
FOS::JUNB	16
SREBF1	14
Rarb	14
Pax6	12
MEIS1	10
PROX1	10
RORA(var.2)	10
LEF1	10
CREB3L1	10
ZBTB33	8
RARA	8
TBX19	8
Srebf1(var.2)	7
MEF2D	6
CLOCK	6
RORA	4
BARX1	4
FOS::JUN(var.2)	4
MIXL1	4
RFX2	3
FOXO4	3
Hoxa9	3
SMAD3	2
FOSB::JUN	2
HNF1A	2
Rfx1	2
NFIC::TLX1	2
ESR1	2
Hes1	2
CREB3	2
Pitx1	1
Sox1	1
TFE3	1
Id2	1
Alx4	1
E2F8	1
HOXB13	1
NKX2-8	1
Klf12	1
HSF2	1
Creb3l2	1

Motif name

Number of overlap

13896

3849

3226

2785

2303