NAIK Genome Database

experiment name	hs_ProstateCarcinoma_LNCAP_undef_SNF2H_SRX1181987	number of peaks	29766
antibody	SNF2H
cell line	LNCAP	Number of reads	60371473
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	1539
FOXA1	1184
Foxa2	687
MYC	640
Ar	604
ERG	575
NFIC	552
MYCN	544
Esrrg	488
Tcf12	486
NR2F1	457
Sox2	446
TCF4	442
TAL1::TCF3	425
SP1	420
GATA3	419
Gabpa	413
ELF1	363
ZEB1	335
TCF3	335
MAX	331
MYBL1	328
RUNX1	312
Gata1	312
ZBTB7A	303
STAT3	300
FOS	297
GATA2	270
CEBPB	266
Gata4	260
E2F4	257
TFAP2A	246
YY1	235
NKX3-2	227
Esrra	226
TFAP2C	225
E2F1	211
RUNX3	201
TEAD4	201
FOSL2	187
Hnf4a	186
BHLHE41	184
PBX1	183
JUND	182
TFAP2A-var.2	180
BATF::JUN	178
ELF3	175
ELK1	175
GATA5	174
MAX::MYC	170
TFAP4	158
EGR1	158
SPI1	153
ZNF740	151
KLF4	148
FOSL1	145
ZNF263	141
JUN	140
Nkx3-1	136
NFKB1	136
NEUROD1	134
ETS1	133
USF1	133
EGR2	131
Rxra	130
TEAD1	129
FOS::JUN	128
TCF7L2	126
Pparg::Rxra	125
POU5F1B	121
TP63	119
Atf3	118
OTX2	117
EBF1	115
CEBPA	113
CDX2	111
Foxj2	107
NR1H2::RXRA	106
USF2	105
Tcf7	102
Pou5f1::Sox2	101
STAT1::STAT2	101
Foxo1	101
SOX9	100
RELA	98
MAFK	96
NFIA	95
Tcf21	94
ETV1	91
REL	90
BHLHE40	86
E2F6	85
MYBL2	85
FLI1	84
CEBPD	82
GATA1::TAL1	80
NR3C2	78
Arnt	78
Mafb	78
ETV3	75
Arid3a	74
ELK4	73
KLF5	73
ERF	73
NRF1	72
TFAP2A-var.3	71
ETV6	70
NFE2	64
PAX5	63
ATF4	62
Hand1::Tcf3	61
MAF::NFE2	61
HEY1	61
ARNT::HIF1A	60
Nfe2l2	60
SMAD2::SMAD3::SMAD4	59
Nr1h3::Rxra	59
MEF2B	59
TFDP1	57
PDX1	55
MAFF	55
THAP1	54
FEV	52
NFKB2	51
CREB1	50
FOXP1	50
HNF4G	50
SP3	49
Klf1	49
NFATC3	48
KLF9	47
STAT1	46
EOMES	46
Atf1	46
ELK3	45
MAFG	45
BCL6B	44
RUNX2	44
HSF1	43
E2F3	43
Bach1::Mafk	41
REST	40
MYB	40
Bcl6	39
Dux	38
Gfi1b	38
TEAD2	35
Ahr::Arnt	33
Vdr	32
NFYA	32
SCRT1	32
RARA::RXRA	31
NFYB	31
DUX4	31
NR4A2	31
ZNF143	30
JUNB	30
SP2	30
MEF2A	29
TP53	29
IRF1	28
Ddit3::Cebpa	27
Stat5a::Stat5b	27
GRHL1	24
NFIL3	23
PRDM1	22
POU2F2	22
HNF1B	22
SRF	22
EGR4	21
BATF3	21
KLF13	21
TP73	20
ELF5	17
TBX1	17
SNAI2	17
NFATC1	17
HINFP	17
FOXP3	16
Mecom	15
SPIB	15
XBP1	15
SP4	14
Gmeb1	14
NR3C1	14
Sox17	13
Hic1;	13
RXRA::VDR	12
ETV4	12
RXRB	12
Arntl	11
GMEB2	10
RXRG	9
SREBF2	9
Rarg	9
Rarb	8
Nr5a2	8
ZBTB18	8
FOXH1	8
EGR3	7
Srebf1(var.2)	7
CREB3L1	7
RFX5	7
GLI2	7
NR2C2	6
PPARG	6
Pax6	6
MEF2D	5
TBX19	5
Ascl2	5
BARX1	4
MAFG::NFE2L1	4
Tcfl5	3
Hes1	3
ZBTB33	3
Creb3l2	3
HNF1A	3
CLOCK	3
PROX1	3
SREBF1	3
MEIS1	3
Hoxa9	2
RFX2	2
LEF1	2
HOXA5	2
NKX2-3	2
HSF2	2
IRF9	2
RORA	2
Rfx1	1
Id2	1
MIXL1	1
IRF2	1
Arid3b	1
Pitx1	1
FOS::JUNB	1
RORA(var.2)	1
Arx	1
FOS::JUND	1
E2F8	1
SMAD3	1
RARA	1
HOXA13	1

Motif name

Number of overlap

1539

1184

687

640

604

ERG