NAIK Genome Database

experiment name	hs_ProstateCarcinoma_LNCAP_undef_NKX3_SRX180379	number of peaks	77753
antibody	NKX3
cell line	LNCAP	Number of reads	7211662
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
FOXA1	16580
NKX3-2	10653
Ar	8431
Foxa2	8162
Nkx3-1	8147
ERG	4694
GATA3	4149
Esrrg	3839
CTCF	2586
NFIC	2461
Gabpa	2409
NR2F1	2223
Gata4	2217
FOS	1953
ELF1	1940
SP1	1773
GATA2	1771
Gata1	1704
CDX2	1674
MYC	1622
GATA5	1617
Tcf12	1592
Sox2	1452
CEBPB	1449
FOSL2	1440
MYCN	1414
STAT3	1310
ELK1	1299
BATF::JUN	1252
JUND	1238
Esrra	1228
MAX	1139
TAL1::TCF3	1124
MYBL1	1111
NR3C2	1090
ZBTB7A	1065
ELF3	1053
ETS1	1025
TCF4	1016
FOSL1	1004
JUN	1003
E2F4	1002
TEAD4	994
E2F1	990
FOS::JUN	935
TCF3	927
ERF	917
PBX1	912
Hnf4a	864
Atf3	854
Foxo1	833
ZEB1	806
TFAP2A	803
RUNX1	799
MYBL2	785
TFAP2C	746
NFIA	726
ETV1	718
Foxj2	715
TEAD1	704
ELK4	691
ZNF740	689
EGR2	672
CEBPA	671
SPI1	665
SOX9	662
BHLHE41	652
Rxra	621
TCF7L2	621
NR1H2::RXRA	610
KLF5	579
EGR1	575
USF1	569
Pparg::Rxra	569
Tcf7	562
TP63	554
USF2	544
KLF4	537
ETV3	535
MAX::MYC	517
YY1	443
ETV6	439
CEBPD	436
TFAP2A-var.2	434
ELK3	428
RUNX3	424
OTX2	422
Mafb	419
GATA1::TAL1	415
BHLHE40	409
MAFK	405
TFAP4	398
FOXP1	386
NEUROD1	384
Tcf21	370
Arid3a	370
NFE2	369
CREB1	369
FLI1	368
GRHL1	364
Nfe2l2	353
PDX1	352
NRF1	347
STAT1::STAT2	339
MAF::NFE2	313
TFDP1	312
Atf1	305
NFYB	302
NFKB1	301
NFYA	301
JUNB	293
Arnt	292
RELA	287
POU5F1B	285
SP3	282
MAFF	273
Klf1	273
ZNF263	268
E2F6	263
HNF4G	251
MAFG	241
MEF2B	237
SP2	236
REL	229
NR3C1	222
E2F3	219
ARNT::HIF1A	219
SMAD2::SMAD3::SMAD4	218
KLF9	215
HNF1B	213
Nr1h3::Rxra	212
PAX5	211
Pou5f1::Sox2	208
NFIL3	206
SP4	204
HEY1	202
ATF4	200
EBF1	198
BATF3	195
EOMES	181
THAP1	175
Bach1::Mafk	173
HSF1	171
TFAP2A-var.3	170
FEV	160
Hand1::Tcf3	160
Ahr::Arnt	153
ZNF143	152
STAT1	144
Mecom	137
RUNX2	136
PRDM1	134
NFATC3	134
Stat5a::Stat5b	134
RARA::RXRA	131
XBP1	130
MYB	129
Dux	122
NFKB2	121
Gfi1b	119
Vdr	118
MEF2A	116
ETV4	112
EGR4	106
DUX4	102
NR4A2	101
Ddit3::Cebpa	101
BCL6B	97
TEAD2	96
ZBTB33	95
SRF	92
REST	92
Bcl6	85
GMEB2	85
TBX1	80
TP53	77
Sox17	77
RXRB	74
FOXP3	72
KLF13	71
IRF1	71
HOXA13	69
TP73	67
RXRG	66
SCRT1	66
ELF5	65
HNF1A	65
NFATC1	60
MAFG::NFE2L1	59
Gmeb1	56
SPIB	54
Hic1;	52
POU2F2	52
RFX5	52
Arntl	51
HINFP	48
SREBF2	41
NR2C2	39
EGR3	39
SREBF1	37
FOXH1	36
Pax6	33
Nr5a2	33
SNAI2	33
BARX1	31
RXRA::VDR	30
TBX19	29
Rarg	28
Rarb	27
Srebf1(var.2)	27
ZBTB18	26
MEIS1	24
CREB3	24
MEF2D	23
CLOCK	22
RORA(var.2)	21
Arx	19
CREB3L1	19
PPARG	17
Ascl2	16
FOXO4	15
LEF1	15
SMAD3	13
GLI2	11
FOS::JUND	11
PROX1	11
Hes1	9
FOS::JUNB	9
RORA	7
RARA	7
NFIC::TLX1	7
MIXL1	6
Creb3l2	6
Hoxa11	6
Hoxa9	5
RFX2	5
Rfx1	4
HOXA5	4
Sox1	4
Alx4	3
Id2	3
FOS::JUN(var.2)	3
Pitx1	3
TFE3	3
SOX4	2
Klf12	2
NFAT5	2
IRF2	2
DBP	2
POU3F2	2
FOSB::JUN	2
HSF2	1
Stat4	1
NKX2-3	1
HES5	1
TBP	1

Motif name

Number of overlap

FOXA1

16580

NKX3-2

10653

8431

Foxa2

8162

Nkx3-1

8147

ERG