NAIK Genome Database

experiment name	hs_ProstateCancer_VCaP_cancer_RB_SRX1490930	number of peaks	22064
antibody	RB
cell line	VCAP	Number of reads	14598716
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
E2F1	2993
E2F4	2220
SP1	1935
CTCF	1416
ZNF740	1153
ERG	1030
E2F6	1024
MYCN	1012
MYC	998
FOXA1	933
TFDP1	933
EGR1	919
Ar	844
Esrrg	821
ZBTB7A	790
Gabpa	770
NRF1	764
ELK1	759
ELF1	745
TAL1::TCF3	734
Tcf12	710
MYBL1	693
TCF4	677
TFAP2A-var.2	648
EGR2	647
NR2F1	642
ZEB1	628
KLF5	613
Sox2	585
NFIC	582
TFAP2A	558
TCF3	556
Foxa2	550
E2F3	531
ETS1	528
STAT3	511
MAX	506
TFAP2C	472
SP3	459
YY1	428
ETV1	420
KLF4	401
ELK4	391
SP2	385
SOX9	371
NFYA	369
Klf1	366
GATA3	331
NFYB	325
TFAP2A-var.3	322
RUNX1	317
BHLHE40	305
BHLHE41	300
ZNF263	300
ELK3	288
MAX::MYC	288
HEY1	279
SP4	274
NFKB1	261
USF2	259
KLF9	250
TEAD4	232
Rxra	231
ERF	226
REL	221
USF1	221
Gata1	212
RUNX3	211
FOS	207
NR1H2::RXRA	207
Hnf4a	207
RELA	205
NKX3-2	204
ELF3	203
CREB1	203
ETV3	202
Esrra	201
Pparg::Rxra	195
Gata4	192
CEBPB	190
ETV6	190
Tcf21	188
PBX1	186
Atf1	182
NEUROD1	182
GATA2	181
OTX2	179
FLI1	178
EBF1	177
TFAP4	171
STAT1::STAT2	171
SPI1	169
TEAD1	168
GATA5	158
NR3C2	157
THAP1	150
NFIA	148
NFKB2	145
TCF7L2	144
FOSL2	141
PAX5	139
Nkx3-1	138
Arnt	135
BATF::JUN	133
POU5F1B	131
Foxj2	130
CDX2	125
FEV	124
JUND	122
EGR4	122
SNAI2	120
Tcf7	119
FOSL1	112
NFATC3	106
Foxo1	102
Atf3	102
MYB	101
SMAD2::SMAD3::SMAD4	100
Arid3a	98
CEBPD	97
BATF3	96
CEBPA	96
JUN	95
TP63	93
Hand1::Tcf3	92
PDX1	91
STAT1	88
FOS::JUN	85
Ahr::Arnt	85
ARNT::HIF1A	84
HSF1	84
NR4A2	81
GMEB2	80
XBP1	76
HINFP	72
Nr1h3::Rxra	72
RUNX2	72
KLF13	69
HNF4G	68
MAFK	67
Mafb	66
Stat5a::Stat5b	65
Pou5f1::Sox2	64
EGR3	62
MYBL2	60
GATA1::TAL1	60
FOXP1	58
NFE2	56
Nfe2l2	55
TEAD2	54
BCL6B	54
ZBTB33	50
RARA::RXRA	48
Gmeb1	48
MAF::NFE2	47
ZNF143	45
Bcl6	45
MEF2B	45
EOMES	42
PRDM1	41
Arntl	40
SPIB	38
NFIL3	37
Bach1::Mafk	37
ATF4	36
Gfi1b	36
MAFF	36
SRF	36
Hic1;	35
Dux	34
JUNB	34
Vdr	33
ETV4	32
MEF2A	31
POU2F2	30
IRF1	29
NR3C1	28
CREB3L1	27
SCRT1	27
GRHL1	27
TP53	26
Sox17	25
FOXH1	25
RXRB	25
MAFG	25
RFX5	24
Rarg	24
REST	24
SREBF2	24
FOXP3	23
DUX4	23
Rarb	23
HNF1B	23
RXRG	22
TBX1	22
NFATC1	21
SREBF1	21
TP73	20
CREB3	16
Mecom	15
LEF1	13
BARX1	12
CLOCK	12
NR2C2	12
ELF5	12
GLI2	10
Ddit3::Cebpa	10
Srebf1(var.2)	10
Ascl2	8
PROX1	8
ZBTB18	7
RORA(var.2)	7
MEF2D	7
HNF1A	7
PPARG	7
Nr5a2	7
MIXL1	6
HOXA13	6
RXRA::VDR	6
Klf12	5
SMAD3	5
RFX2	5
MAFG::NFE2L1	5
Arx	4
TBX19	4
MEIS1	4
Hes1	4
Pitx1	4
Hoxa9	3
Creb3l2	3
E2F8	3
Pax6	3
HES5	3
HOXA5	2
NFAT5	2
Sox1	2
E2F2	2
RORA	2
IRF2	2
Id2	2
Rfx1	2
FOS::JUNB	2
POU3F2	1
Alx4	1
ATF7	1
FOS::JUND	1
SOX4	1
NFIC::TLX1	1
DBP	1
TBP	1
FOXO4	1
Stat4	1
RARA	1
HSF2	1

Motif name

Number of overlap

2993

2220

1935

1416

1153