NAIK Genome Database

experiment name	hs_ProstateCancer_VCaP_cancer_HDAC2_SRX059712	number of peaks	34808
antibody	HDAC2
cell line	VCAP	Number of reads	20658214
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
Ar	3166
FOXA1	2988
Foxa2	1936
MYCN	1635
MYC	1391
ERG	1387
Esrrg	1277
SP1	1205
E2F1	1143
NR2F1	1133
MAX	1123
EGR1	982
TAL1::TCF3	961
TFAP2A-var.2	944
TFAP2A	939
ZNF740	932
TCF4	904
Tcf12	854
Gabpa	818
ZBTB7A	760
TCF3	728
TFAP2C	699
MAX::MYC	691
ZEB1	687
NR3C2	660
EGR2	659
GATA3	562
ELF1	556
NKX3-2	537
Esrra	514
NFIC	512
E2F4	498
Sox2	491
BHLHE41	479
NRF1	432
Nkx3-1	427
TFAP2A-var.3	426
E2F6	418
Hnf4a	411
CTCF	406
NFKB1	396
HEY1	392
KLF4	384
Gata4	376
RUNX1	368
MYBL1	351
Gata1	336
BHLHE40	331
TEAD4	327
ZNF263	325
STAT3	317
GATA2	312
EBF1	312
FOS	303
ETS1	302
Rxra	302
TFDP1	302
GATA5	299
REL	294
USF2	285
YY1	270
KLF5	268
NR1H2::RXRA	267
Pparg::Rxra	259
KLF9	258
TEAD1	257
SP3	246
USF1	235
FLI1	230
POU5F1B	228
ELK1	228
NFKB2	224
Klf1	220
FOSL2	219
RELA	213
ETV1	211
CEBPB	206
Arnt	200
SOX9	200
ERF	197
BATF::JUN	196
MYBL2	193
SPI1	191
ELF3	191
Foxj2	186
PBX1	183
JUND	179
NFIA	177
Foxo1	175
TP63	174
CDX2	174
SNAI2	174
NEUROD1	173
Tcf21	167
ARNT::HIF1A	166
OTX2	161
TCF7L2	160
JUN	149
FOSL1	148
CEBPA	147
Tcf7	141
RUNX3	140
TFAP4	139
HNF4G	139
Atf3	135
PAX5	133
FOS::JUN	132
NR3C1	130
Hand1::Tcf3	129
EGR4	126
STAT1::STAT2	118
SMAD2::SMAD3::SMAD4	117
FEV	117
Ahr::Arnt	115
CEBPD	114
Mafb	113
THAP1	106
ETV6	102
ELK4	101
FOXP1	97
CREB1	95
GATA1::TAL1	92
NFATC3	92
ETV3	88
Pou5f1::Sox2	87
ELK3	80
E2F3	76
PDX1	71
RARA::RXRA	67
HSF1	66
MAFK	66
Nr1h3::Rxra	62
SPIB	60
NR4A2	60
EGR3	59
MYB	56
RUNX2	56
NFE2	56
Atf1	55
JUNB	52
Arid3a	52
Nfe2l2	52
Hic1;	50
Stat5a::Stat5b	48
NFIL3	47
GRHL1	47
MAF::NFE2	46
PRDM1	45
ZNF143	45
HINFP	44
STAT1	42
KLF13	41
REST	41
MEF2B	41
Vdr	40
EOMES	39
MAFF	39
RXRB	38
Arntl	36
Bach1::Mafk	36
SCRT1	35
SP2	34
RXRG	34
BATF3	34
ETV4	34
Gmeb1	33
TP73	33
SP4	32
MAFG	32
TEAD2	32
HNF1B	32
Dux	31
IRF1	31
ATF4	31
XBP1	31
TP53	31
BCL6B	30
Bcl6	30
FOXH1	28
NR2C2	28
GMEB2	28
Mecom	25
ZBTB33	25
CREB3L1	24
DUX4	24
NFYB	24
Gfi1b	23
RFX5	22
GLI2	21
POU2F2	20
Sox17	20
NFYA	19
NFATC1	19
Ddit3::Cebpa	19
FOXP3	18
MEF2A	17
SRF	16
ELF5	15
CLOCK	15
Rarg	14
TBX1	13
Nr5a2	13
RXRA::VDR	13
RORA(var.2)	9
Pax6	9
MAFG::NFE2L1	9
Tcfl5	9
CREB3	9
TBX19	8
Ascl2	8
HNF1A	7
LEF1	7
SREBF1	7
ZBTB18	6
Creb3l2	6
HOXA13	6
MEF2D	6
SMAD3	5
Srebf1(var.2)	5
SREBF2	5
BARX1	5
RORA	4
RFX2	4
Rarb	4
FOXO4	4
NKX2-3	4
Hes1	3
Arx	3
Pitx1	3
PROX1	3
Nkx2-5-var.2	3
PPARG	3
Klf12	2
ESR1	2
MEIS1	2
Rfx1	2
HOXA5	2
RARA	2
HES5	2
HSF2	2
IRF2	2
ATF7	1
MTF1	1
NFIC::TLX1	1
MIXL1	1
FOS::JUND	1
TBP	1
SREBF2(var.2)	1
FOS::JUN(var.2)	1
HOXB13	1
E2F8	1
ISX	1
Myod1	1
Alx4	1
Stat4	1
POU3F2	1

Motif name

Number of overlap

3166

2988

1936

1635

1391