NAIK Genome Database

experiment name	hs_ProstateCancer_VCaP_cancer_HDAC2_SRX059711	number of peaks	28753
antibody	HDAC2
cell line	VCAP	Number of reads	15196266
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
FOXA1	1837
MYCN	1534
Foxa2	1361
MYC	1312
E2F1	1124
SP1	1124
MAX	1020
EGR1	986
ZNF740	951
ERG	950
NR2F1	929
TFAP2A-var.2	900
TAL1::TCF3	889
Esrrg	884
Ar	874
TFAP2A	863
TCF4	811
Tcf12	733
ZBTB7A	706
TFAP2C	676
TCF3	675
MAX::MYC	662
Gabpa	646
ZEB1	636
EGR2	619
ELF1	502
E2F4	477
NFIC	468
NRF1	437
GATA3	435
Esrra	426
BHLHE41	420
TFAP2A-var.3	394
CTCF	386
E2F6	384
Sox2	381
KLF4	331
BHLHE40	330
NFKB1	326
MYBL1	325
HEY1	319
RUNX1	316
Hnf4a	303
EBF1	298
Gata4	288
NKX3-2	280
ETS1	279
Nkx3-1	274
TFDP1	272
STAT3	272
USF2	271
TEAD4	271
GATA5	264
ZNF263	263
KLF5	260
Gata1	257
ELK1	256
FOS	251
KLF9	248
YY1	238
GATA2	235
REL	229
ETV1	225
Klf1	224
Rxra	224
TEAD1	223
NR1H2::RXRA	217
FLI1	210
Pparg::Rxra	208
Arnt	204
USF1	204
SP3	192
FOSL2	178
RELA	177
SNAI2	176
POU5F1B	175
NFKB2	171
OTX2	166
Foxj2	166
CDX2	165
ERF	160
ARNT::HIF1A	159
BATF::JUN	157
PBX1	156
SOX9	155
NEUROD1	149
ELF3	149
MYBL2	148
NR3C2	147
NFIA	143
SPI1	142
RUNX3	141
JUND	140
CEBPB	138
PAX5	131
TCF7L2	131
Foxo1	128
Tcf21	128
FEV	126
TFAP4	125
STAT1::STAT2	123
FOSL1	123
JUN	122
ELK4	116
EGR4	114
Ahr::Arnt	114
THAP1	114
SMAD2::SMAD3::SMAD4	113
Tcf7	111
FOS::JUN	111
Hand1::Tcf3	108
Atf3	105
CEBPA	103
TP63	99
ETV3	97
ETV6	96
CREB1	84
HNF4G	81
NFATC3	80
GATA1::TAL1	78
E2F3	78
CEBPD	77
FOXP1	76
ELK3	72
Mafb	72
EGR3	65
Atf1	64
NFE2	62
NR4A2	61
MAFK	60
PDX1	59
Pou5f1::Sox2	58
SPIB	55
RARA::RXRA	55
GRHL1	52
Nfe2l2	51
MYB	49
RUNX2	49
MAF::NFE2	45
Nr1h3::Rxra	45
Hic1;	43
EOMES	42
Bach1::Mafk	42
MAFF	41
HSF1	40
Arid3a	40
MEF2B	39
MAFG	38
JUNB	37
Stat5a::Stat5b	37
HINFP	37
Arntl	36
KLF13	34
PRDM1	34
REST	34
SP4	32
TEAD2	32
GMEB2	31
STAT1	30
ZNF143	30
BATF3	30
RXRB	29
RXRG	29
XBP1	29
ETV4	29
NR3C1	28
SP2	28
Gmeb1	28
TP73	28
HNF1B	27
BCL6B	27
SCRT1	27
NFIL3	27
FOXH1	27
Bcl6	26
Sox17	26
CREB3L1	26
NR2C2	26
ZBTB33	24
FOXP3	22
Vdr	22
TP53	22
Ddit3::Cebpa	20
Mecom	20
MEF2A	17
IRF1	17
GLI2	17
NFYB	17
NFATC1	16
RFX5	16
CLOCK	15
ELF5	15
TBX1	15
Dux	14
POU2F2	14
ATF4	14
Rarg	14
SRF	14
DUX4	13
Gfi1b	13
PPARG	12
HNF1A	12
HOXA13	10
Nr5a2	10
LEF1	10
SREBF1	9
RORA(var.2)	9
NFYA	8
ZBTB18	7
TBX19	7
Creb3l2	7
MAFG::NFE2L1	7
RXRA::VDR	6
CREB3	6
SREBF2	6
FOXO4	6
Srebf1(var.2)	5
Rarb	5
Ascl2	5
Pax6	5
MEF2D	4
BARX1	4
RFX2	4
Pitx1	4
PROX1	3
Tcfl5	3
NKX2-3	2
RARA	2
MEIS1	2
FOS::JUND	2
RORA	2
HSF2	2
Rfx1	2
SMAD3	2
Hoxa11	2
ESR1	2
Arx	1
HOXB13	1
POU3F2	1
ISX	1
Klf12	1
SREBF2(var.2)	1
FOS::JUNB	1
Myod1	1
TFE3	1
SOX4	1
MIXL1	1
HES5	1
IRF2	1
Hes1	1
Id2	1

Motif name

Number of overlap

1837

1534

1361

1312

1124