NAIK Genome Database

experiment name	hs_ProstateCancer_PC3_cancer_DNMT1_SRX1021632	number of peaks	8689
antibody	DNMT1
cell line	PC3	Number of reads	14191465
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
FOS	2250
BATF::JUN	1660
FOSL2	1640
FOSL1	1469
JUND	1441
JUN	1327
FOS::JUN	1278
PBX1	1026
Atf3	973
FOXA1	926
Foxa2	705
ERG	626
RUNX1	546
Gabpa	503
Esrrg	469
NFIC	437
STAT3	414
NR2F1	410
ELF1	396
Sox2	389
SP1	386
NFE2	370
CTCF	364
JUNB	349
Ar	336
Nfe2l2	335
Tcf12	319
TEAD4	313
CEBPB	304
MYC	290
TEAD1	278
MYCN	257
TAL1::TCF3	255
MYBL1	253
ETS1	253
RUNX3	250
ELF3	232
Esrra	228
MAF::NFE2	211
TCF3	209
ELK1	208
MAX	208
TCF4	207
Pparg::Rxra	200
MAFF	199
Rxra	196
ZBTB7A	191
NR1H2::RXRA	188
MAFG	178
GATA3	175
CEBPA	173
MAFK	171
RUNX2	170
E2F4	164
TP63	163
KLF4	163
FLI1	159
Tcf21	157
TFAP2A	152
Hnf4a	149
Foxo1	147
ZNF740	143
E2F1	136
KLF5	135
CDX2	135
SPI1	135
EGR1	127
GATA2	127
NFKB1	127
TFAP2C	126
Foxj2	125
Bach1::Mafk	123
ETV1	122
EGR2	121
Gata4	120
Gata1	120
ERF	118
SOX9	118
ETV6	116
ZEB1	114
CEBPD	109
ELK4	108
MYBL2	105
MAX::MYC	102
ETV4	99
REL	99
NKX3-2	97
RELA	96
USF1	96
TFAP4	94
TCF7L2	93
Mafb	93
NFIA	92
POU5F1B	90
GATA5	87
NR3C2	86
Tcf7	85
STAT1::STAT2	84
TFAP2A-var.2	83
YY1	82
USF2	79
FOXP1	78
Nkx3-1	75
ETV3	72
PAX5	72
CREB1	72
BHLHE41	61
Arid3a	61
GATA1::TAL1	56
Arnt	56
ELK3	56
NRF1	55
MEF2B	54
Nr1h3::Rxra	54
NFKB2	53
Pou5f1::Sox2	52
SMAD2::SMAD3::SMAD4	51
RARA::RXRA	50
EBF1	50
ARNT::HIF1A	49
SP3	48
HNF4G	48
Klf1	48
E2F6	46
HSF1	46
BHLHE40	45
ZNF263	45
NEUROD1	45
PDX1	44
HEY1	42
MAFG::NFE2L1	42
Stat5a::Stat5b	41
KLF9	41
NFIL3	41
RXRB	41
Hand1::Tcf3	40
TFDP1	39
OTX2	39
RXRG	37
BATF3	37
MEF2A	37
PRDM1	37
NFYB	34
Atf1	33
SP2	33
ATF4	31
TP53	31
FEV	31
NR2C2	30
TBX1	30
HNF1B	28
Gfi1b	28
Ahr::Arnt	28
STAT1	27
TFAP2A-var.3	26
SP4	26
Ddit3::Cebpa	25
NR3C1	24
TEAD2	24
ZNF143	24
NFYA	23
FOS::JUND	23
Dux	22
Vdr	22
MYB	22
TP73	21
NFATC1	20
BCL6B	19
FOS::JUNB	18
NR4A2	17
Bcl6	17
DUX4	17
RFX5	16
EOMES	15
EGR4	15
FOXP3	14
THAP1	14
XBP1	13
SCRT1	13
E2F3	13
NFATC3	13
SPIB	12
POU2F2	12
Sox17	12
GRHL1	12
SRF	11
Mecom	11
IRF1	10
FOXH1	10
ELF5	10
RXRA::VDR	9
Hic1;	8
EGR3	8
TBX19	8
Rarg	8
Gmeb1	8
MEIS1	7
PPARG	7
REST	7
ZBTB18	7
HNF1A	7
ZBTB33	6
GMEB2	6
Arntl	6
SREBF1	6
KLF13	5
LEF1	5
RARA	4
Pax6	4
MEF2D	4
HOXA13	4
BARX1	4
HINFP	4
CREB3	4
RFX2	4
RORA(var.2)	3
FOS::JUN(var.2)	3
SNAI2	3
HSF2	3
SREBF2	3
CLOCK	2
Rarb	2
SMAD3	2
FOXO4	2
Rfx1	2
Srebf1(var.2)	2
TFEB	1
IRF9	1
GLI2	1
TFE3	1
HOXA5	1
Ascl2	1
FOSB::JUN	1
Nr5a2	1
ISL2	1
Pitx1	1
CREB3L1	1
NFIC::TLX1	1
NFAT5	1

Motif name

Number of overlap

2250

1660

1640

1469

1441