experiment name
hs_neuroblastoma_SKNSH_cancer_RAD21_SRX100542
number of peaks
139664
antibody
RAD21
cell line
SKNSH
Number of reads
51810618
sra ftp link
link
SRX search
link
homer denovo motifs
link
Genome view
link
Overlapping motifs:
Motif name
Number of overlap
CTCF
38243
FOS
10579
MYC
9960
Tcf12
9064
MYCN
9018
FOSL2
8665
JUND
7947
SP1
7531
NFIC
7373
BATF::JUN
7268
TAL1::TCF3
6451
FOSL1
6332
TCF4
6023
PBX1
5995
JUN
5959
FOS::JUN
5880
TCF3
5396
ERG
5306
NR2F1
5182
MAX
5015
Gabpa
4799
GATA3
4777
Atf3
4713
ELF1
4513
RUNX1
4426
Esrrg
4416
ZNF740
4348
Sox2
4315
STAT3
3811
GATA2
3576
ZBTB7A
3569
TFAP2A
3563
FOXA1
3436
E2F1
3418
E2F4
3346
Gata1
3314
EGR1
3162
MYBL1
3160
ZEB1
3120
TFAP2A-var.2
3013
MAX::MYC
2981
Gata4
2943
TFAP2C
2873
TEAD4
2847
YY1
2804
RUNX3
2779
ELK1
2411
Foxa2
2386
Tcf21
2386
NEUROD1
2367
ETS1
2274
Ar
2224
EGR2
2142
BHLHE41
2135
TEAD1
2128
USF1
2108
TFAP4
2024
NR1H2::RXRA
1904
CEBPB
1871
NFE2
1782
GATA5
1719
JUNB
1701
USF2
1697
NFKB1
1676
Nfe2l2
1670
KLF4
1656
FLI1
1638
Pparg::Rxra
1609
Rxra
1601
ZNF263
1593
ELF3
1517
Esrra
1512
NRF1
1485
ETV1
1480
NFIA
1476
EBF1
1388
Hnf4a
1380
SPI1
1360
KLF5
1347
TFAP2A-var.3
1328
MAF::NFE2
1311
OTX2
1308
BHLHE40
1302
E2F6
1280
MAFK
1256
MAFF
1197
REL
1093
RELA
1051
Arid3a
1051
CREB1
1000
GATA1::TAL1
999
RUNX2
977
STAT1::STAT2
959
MAFG
958
CEBPA
950
ELK4
944
ETV6
934
Nr1h3::Rxra
931
TP63
923
TCF7L2
911
Mafb
910
SOX9
900
Bach1::Mafk
891
SMAD2::SMAD3::SMAD4
859
PAX5
854
SP3
816
ETV3
815
POU5F1B
795
Tcf7
793
ERF
789
HEY1
766
Foxj2
766
Foxo1
759
Hand1::Tcf3
756
NFKB2
728
THAP1
725
CEBPD
719
ELK3
717
SP4
716
KLF9
705
Klf1
690
NKX3-2
689
E2F3
671
Pou5f1::Sox2
669
Atf1
664
Arnt
639
PDX1
634
TFDP1
632
CDX2
554
RARA::RXRA
553
HSF1
552
MEF2B
543
NR3C2
541
ARNT::HIF1A
529
BATF3
474
SP2
474
HNF4G
468
MEF2A
465
STAT1
442
Stat5a::Stat5b
404
EOMES
390
FOXP1
376
REST
348
TEAD2
343
NFYB
329
MYB
322
ZNF143
320
EGR4
320
PRDM1
320
BCL6B
319
Dux
311
ATF4
309
TP53
301
MYBL2
297
IRF1
288
Gfi1b
278
NFATC3
275
DUX4
268
Bcl6
259
NFYA
259
Ahr::Arnt
247
XBP1
240
SRF
237
Vdr
235
MAFG::NFE2L1
227
SNAI2
219
Nkx3-1
217
FEV
214
NFIL3
211
RFX5
201
KLF13
189
TP73
184
SCRT1
175
FOXH1
170
ETV4
164
Ddit3::Cebpa
164
TBX1
163
NR4A2
163
EGR3
157
POU2F2
156
NFATC1
154
HNF1B
151
ZBTB18
147
RXRB
146
NR3C1
140
HINFP
140
Arntl
135
RXRG
134
Sox17
131
FOXP3
130
Hic1;
123
SPIB
117
GMEB2
115
ZBTB33
87
MEIS1
84
ELF5
78
SREBF2
75
GRHL1
75
Mecom
73
Gmeb1
69
PPARG
67
SREBF1
67
NR2C2
58
MEF2D
58
CLOCK
49
TBX19
48
Rarg
47
RXRA::VDR
47
Pax6
46
Ascl2
45
FOS::JUND
41
GLI2
38
FOS::JUNB
37
CREB3L1
36
Rarb
33
Srebf1(var.2)
32
LEF1
31
CREB3
27
Nr5a2
24
SMAD3
24
PROX1
23
RARA
21
RORA(var.2)
20
HNF1A
20
RFX2
17
Hes1
12
BARX1
11
MIXL1
11
NFIC::TLX1
11
Hoxa9
11
Rfx1
10
HSF2
9
Creb3l2
8
FOXO4
7
Klf12
7
RORA
6
NFAT5
6
FOSB::JUN
5
FOS::JUN(var.2)
5
PAX3
4
Alx4
4
IRF2
4
POU3F2
4
TFE3
4
Sox1
4
Arx
3
Id2
3
Pitx1
3
HES5
3
Stat4
3
Hoxa11
3
HOXA13
2
NKX2-3
2
E2F8
2
SOX4
2
Nkx2-5-var.2
1
E2F2
1
HOXB13
1
TFEB
1
Myod1
1
NKX2-8
1
DBP
1
ISX
1
TBP
1
IRF9
1
ATF7
1
HOXA5
1