NAIK Genome Database

experiment name	hs_neuroblastoma_SHSY5Y_cancer_LSD1_SRX757045	number of peaks	19546
antibody	LSD1
cell line	SHSY5Y	Number of reads	12011004
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
SP1	1530
ELK1	1379
ERG	1236
E2F4	1145
E2F1	1119
ELF1	1085
Gabpa	1053
MYCN	1035
ETS1	977
MYC	958
NRF1	938
ZBTB7A	874
ZNF740	837
Tcf12	814
ELK4	749
TAL1::TCF3	735
MAX	731
ETV1	705
NFIC	683
EGR1	667
GATA3	666
Esrrg	636
MYBL1	636
TCF4	632
EGR2	629
NR2F1	615
STAT3	613
TCF3	608
ELK3	549
KLF5	541
CTCF	532
ERF	498
ETV3	496
TFAP2A-var.2	469
TFDP1	466
YY1	452
BHLHE40	448
TFAP2A	447
GATA2	433
TFAP2C	431
USF1	397
Atf1	396
MAX::MYC	393
SP3	387
USF2	383
ZEB1	362
Gata4	360
Gata1	357
CREB1	356
KLF4	356
ETV6	353
BHLHE41	347
Sox2	339
SOX9	332
NFYB	330
SP2	328
RUNX1	318
NFYA	315
Ar	297
NEUROD1	297
E2F6	293
SP4	287
FOS	281
Tcf21	278
Klf1	263
GATA5	261
PBX1	258
FOXA1	252
KLF9	244
E2F3	238
FOSL2	235
ZNF263	234
HEY1	225
ELF3	222
Esrra	219
RUNX3	212
FLI1	210
JUND	208
BATF3	203
THAP1	202
NFIA	202
BATF::JUN	200
TFAP2A-var.3	197
RFX5	196
XBP1	195
Arnt	191
NR1H2::RXRA	186
STAT1::STAT2	186
PAX5	185
Foxa2	185
Rxra	181
GMEB2	174
FOSL1	173
NFKB1	172
POU5F1B	171
Pparg::Rxra	167
JUN	167
TFAP4	166
EBF1	163
ZNF143	162
Atf3	156
FOS::JUN	155
RELA	150
NFATC3	150
TEAD4	149
Hnf4a	143
SPI1	142
SMAD2::SMAD3::SMAD4	139
TEAD1	136
CEBPB	132
GATA1::TAL1	132
FEV	129
OTX2	129
REL	125
Hand1::Tcf3	123
ARNT::HIF1A	120
EGR4	120
STAT1	115
Foxj2	113
RUNX2	113
NKX3-2	111
MYB	105
Foxo1	104
CEBPD	103
NR4A2	89
NFE2	89
TP63	89
Mafb	87
PDX1	87
Ahr::Arnt	87
KLF13	85
Gmeb1	85
NFKB2	83
CEBPA	82
Stat5a::Stat5b	82
MAF::NFE2	81
Arntl	79
Nfe2l2	78
SNAI2	73
RARA::RXRA	71
EGR3	67
HINFP	67
ZBTB33	66
Bach1::Mafk	65
Nr1h3::Rxra	64
JUNB	63
MAFF	63
Pou5f1::Sox2	59
TCF7L2	58
NR3C2	58
HNF4G	57
Tcf7	56
SREBF2	55
HSF1	52
ETV4	52
ATF4	50
MAFK	50
SREBF1	49
CDX2	48
RFX2	48
MAFG	47
FOXP1	46
Arid3a	43
SRF	43
EOMES	40
SPIB	39
Rfx1	38
TEAD2	38
Dux	38
BCL6B	36
MEF2B	35
FOXP3	33
Gfi1b	32
Hic1;	31
TBX1	30
CLOCK	30
NFIL3	30
Rarb	29
ELF5	28
PRDM1	27
Bcl6	27
MEF2A	25
DUX4	25
NR2C2	25
Vdr	25
NFATC1	25
Rarg	25
RXRB	24
SCRT1	24
Nkx3-1	24
Sox17	22
CREB3L1	21
REST	21
FOXH1	20
NR3C1	20
Ddit3::Cebpa	20
RXRG	19
CREB3	19
TP53	18
IRF1	18
Ascl2	17
GLI2	16
ZBTB18	16
TP73	15
MYBL2	15
BARX1	12
Pax6	12
RXRA::VDR	11
POU2F2	10
Mecom	9
Hes1	9
MEIS1	8
PPARG	8
PROX1	8
LEF1	8
Creb3l2	8
MAFG::NFE2L1	8
HNF1B	6
Nr5a2	6
TBX19	6
RORA(var.2)	5
Id2	5
MIXL1	5
MEF2D	5
GRHL1	4
Arx	4
Srebf1(var.2)	3
E2F8	3
HOXA13	3
Pitx1	3
SMAD3	3
NKX2-3	2
PAX3	2
Klf12	2
HSF2	2
ATF7	2
FOSB::JUN	2
RARA	1
Sox1	1
FOS::JUN(var.2)	1
NFIC::TLX1	1
IRF9	1
TBP	1
HNF1A	1
HES5	1
POU3F2	1
Hoxa11	1
TFE3	1
RORA	1
FOXO4	1

Motif name

Number of overlap

1530

1379

1236

1145

1119