NAIK Genome Database

experiment name	hs_MCF10A_MCF10A_undef_BRCA1_SRX481566	number of peaks	10232
antibody	BRCA1
cell line	MCF10A	Number of reads	25802294
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
MAX	755
MYCN	618
MYC	546
POU5F1B	464
FOS	371
MAX::MYC	358
SP1	344
ERG	302
RUNX1	298
TAL1::TCF3	280
FOSL2	270
TCF4	270
Ar	263
Tcf12	262
BATF::JUN	254
JUND	251
NR2F1	240
FOSL1	236
EGR2	229
KLF9	226
Atf3	220
JUN	220
E2F4	219
Gabpa	219
EGR1	218
TCF3	216
FOS::JUN	207
ZNF740	206
KLF4	203
TFAP2C	200
Esrrg	199
PBX1	197
YY1	197
ZBTB7A	196
FOXA1	196
E2F1	194
TFAP2A	187
ELF1	186
TP63	186
CEBPB	184
ELK1	177
STAT3	176
ZEB1	176
Sox2	169
Esrra	166
NFIC	165
MYBL1	154
CEBPA	153
BHLHE41	140
KLF5	138
CTCF	138
ETS1	137
TEAD4	137
NRF1	134
USF2	127
BHLHE40	123
HEY1	120
Foxa2	120
ETV1	116
TFDP1	114
USF1	112
TFAP2A-var.2	111
ZNF263	108
TEAD1	107
Tcf21	107
Arnt	100
CEBPD	100
JUNB	98
Pou5f1::Sox2	95
ELK4	90
Pparg::Rxra	89
ARNT::HIF1A	88
Rxra	86
NR3C2	85
ETV6	85
Hnf4a	82
SP3	82
FLI1	80
SOX9	78
ETV3	76
ERF	76
Klf1	76
E2F6	74
SPI1	71
STAT1::STAT2	71
Atf1	68
RUNX3	67
CREB1	66
NR1H2::RXRA	66
NFE2	65
ELF3	64
Gata1	62
NFKB1	61
Ahr::Arnt	60
Nfe2l2	59
TFAP4	59
Tcfl5	59
RUNX2	58
ELK3	58
TP53	57
PAX5	56
EBF1	55
RELA	55
Gata4	52
TP73	52
GATA2	52
SMAD2::SMAD3::SMAD4	51
NFIA	51
Bach1::Mafk	49
Foxj2	49
MAFF	48
MAF::NFE2	48
GATA3	48
FEV	47
NEUROD1	45
MAFK	45
TFAP2A-var.3	44
EGR4	44
REL	43
Mafb	41
Hand1::Tcf3	41
ETV4	41
THAP1	40
NFATC3	40
GATA5	39
E2F3	38
MAFG	38
NR4A2	37
TCF7L2	36
Tcf7	36
OTX2	33
Gmeb1	32
NFKB2	32
ATF4	30
Nr1h3::Rxra	28
NFIL3	28
BATF3	27
Foxo1	27
SP2	26
RARA::RXRA	24
XBP1	23
NFYB	23
HNF4G	23
Ddit3::Cebpa	23
STAT1	23
MYB	23
GMEB2	22
GATA1::TAL1	22
NFYA	22
SP4	21
EGR3	21
NKX3-2	20
Hic1;	20
HINFP	20
FOXP1	20
Arntl	19
CDX2	18
HSF1	18
NR3C1	16
IRF1	16
SNAI2	16
EOMES	16
Dux	16
PRDM1	15
SCRT1	15
SPIB	15
BCL6B	14
RXRB	14
Arid3a	14
RXRG	14
Stat5a::Stat5b	14
Gfi1b	13
Bcl6	13
Vdr	13
CREB3L1	13
ZNF143	13
PDX1	13
NR2C2	12
TEAD2	12
Rarb	12
POU2F2	12
TBX1	12
MYBL2	12
FOXP3	11
FOXH1	11
Rarg	11
KLF13	11
ELF5	11
NFATC1	10
MEF2B	8
REST	8
ZBTB33	7
ZBTB18	7
CLOCK	7
SREBF1	7
Nkx3-1	6
GLI2	6
FOS::JUND	6
MAFG::NFE2L1	5
Sox17	5
SRF	5
GRHL1	5
FOS::JUNB	5
DUX4	5
SREBF2	5
LEF1	4
RFX5	4
Pax6	4
Mecom	4
Creb3l2	3
MEF2A	3
CREB3	3
RORA(var.2)	3
Hes1	3
Ascl2	3
TBX19	3
Srebf1(var.2)	3
MTF1	3
MEIS1	3
PPARG	3
NFAT5	2
SMAD3	2
NKX2-3	2
RORA	2
Pitx1	2
Rfx1	2
HSF2	2
RFX2	2
FOXO4	2
POU3F2	2
HNF1B	2
BARX1	2
ISX	1
FOS::JUN(var.2)	1
HOXB13	1
PROX1	1
SREBF2(var.2)	1
HOXA13	1
PAX3	1
Hes2	1
DBP	1
RXRA::VDR	1
HOXA5	1
MEOX2	1
Id2	1

Motif name

Number of overlap

755

618

546

464

371