NAIK Genome Database

experiment name	hs_MammaryGland_MCF7_Cancer_CTCF_DRX013210	number of peaks	26870
antibody	CTCF	link to motif view if antibody and consensus motif is the same
cell line	MCF7	Number of reads	44754822
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	13394
MYC	3300
MYCN	2891
Tcf12	2477
TCF4	2011
SP1	1998
NFIC	1931
ZEB1	1718
TAL1::TCF3	1672
NR2F1	1512
TCF3	1341
MYBL1	1223
Sox2	1196
STAT3	1084
RUNX1	1016
RUNX3	976
ZBTB7A	971
FOXA1	913
ERG	904
MAX	891
Gabpa	870
E2F4	839
Esrrg	837
TFAP2C	804
TFAP2A	804
TEAD4	803
ELF1	783
FOS	714
ZNF740	685
YY1	685
TFAP2A-var.2	670
Foxa2	659
MAX::MYC	655
NR1H2::RXRA	620
Rxra	560
FOSL2	552
Pparg::Rxra	548
GATA3	546
TFAP4	542
E2F1	538
TEAD1	526
BATF::JUN	526
PBX1	503
EGR1	503
ELK1	493
BHLHE41	491
Gata1	486
NEUROD1	480
Ar	479
FOSL1	474
JUND	467
EGR2	463
Arid3a	462
CEBPB	458
NFKB1	446
ZNF263	443
KLF4	432
Nr1h3::Rxra	424
Atf3	422
JUN	401
OTX2	384
Hnf4a	380
EBF1	362
Esrra	361
Gata4	359
FOS::JUN	356
GATA2	354
USF2	345
USF1	326
Tcf21	324
ETS1	304
TFAP2A-var.3	301
E2F6	294
STAT1::STAT2	292
THAP1	290
SOX9	287
ELF3	282
RELA	275
Foxj2	274
CEBPA	269
NFIA	268
REL	266
BHLHE40	261
TCF7L2	261
KLF5	259
PAX5	258
GATA5	251
CEBPD	242
NKX3-2	234
NRF1	233
Tcf7	231
SMAD2::SMAD3::SMAD4	228
SPI1	224
FLI1	221
E2F3	212
MAFK	208
Foxo1	204
TP63	202
POU5F1B	193
ETV1	190
PDX1	186
CDX2	180
Mafb	178
NFKB2	177
NFE2	170
Pou5f1::Sox2	165
Hand1::Tcf3	157
Arnt	156
KLF9	155
CREB1	155
Klf1	148
JUNB	147
Nfe2l2	146
EOMES	141
MAF::NFE2	140
TEAD2	140
HNF4G	139
MAFF	139
HSF1	137
STAT1	137
ELK4	136
FOXP1	135
RUNX2	134
MYBL2	130
BCL6B	128
ETV6	128
Bach1::Mafk	125
ETV3	117
ARNT::HIF1A	116
MEF2B	116
RARA::RXRA	115
SP4	115
GATA1::TAL1	108
Vdr	108
SP3	108
MAFG	104
Bcl6	104
Atf1	101
MYB	101
MEF2A	98
HEY1	98
NR3C2	93
Gfi1b	92
TP53	89
Stat5a::Stat5b	89
Nkx3-1	83
Ahr::Arnt	77
TFDP1	77
ERF	76
SCRT1	75
NFIL3	69
ZBTB18	68
ELK3	67
ATF4	64
PRDM1	62
SRF	58
BATF3	57
KLF13	56
NFATC3	55
TBX1	52
ZNF143	51
FEV	50
NR4A2	49
SNAI2	48
PPARG	46
Hic1;	46
IRF1	46
FOXP3	46
Ddit3::Cebpa	44
RXRB	43
EGR4	43
POU2F2	43
NFYB	43
RXRG	41
REST	40
FOXH1	38
SP2	37
NFYA	37
SPIB	36
RFX5	35
Dux	34
TP73	31
HINFP	30
HNF1B	29
ELF5	27
NFATC1	27
NR3C1	24
DUX4	24
SREBF2	22
Sox17	21
GRHL1	20
MEIS1	19
Ascl2	19
MAFG::NFE2L1	19
GLI2	18
ETV4	18
XBP1	17
SREBF1	17
Srebf1(var.2)	16
MEF2D	16
Arntl	15
EGR3	15
NR2C2	14
Rarg	14
Mecom	14
Rarb	10
LEF1	10
RXRA::VDR	10
RORA(var.2)	10
TBX19	10
FOS::JUND	9
Nr5a2	8
RARA	8
Pax6	7
FOS::JUNB	7
CLOCK	7
CREB3L1	6
SMAD3	6
Hoxa9	5
ZBTB33	5
HOXA13	5
Gmeb1	5
PROX1	5
HSF2	3
BARX1	3
TFE3	3
HNF1A	3
CREB3	3
Hes1	3
Alx4	2
RORA	2
MIXL1	2
Creb3l2	2
FOXO4	1
Id2	1
E2F2	1
E2F8	1
HOXB13	1
NFIC::TLX1	1
GMEB2	1

Motif name

Number of overlap

13394

3300

2891

2477

2011