NAIK Genome Database

experiment name	hs_MammaryEpithelialCel_HMEC_Normal_CTCF_SRX038563	number of peaks	30688
antibody	CTCF	link to motif view if antibody and consensus motif is the same
cell line	HMEC	Number of reads	10822589
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Overlapping motifs:

Motif name	Number of overlap
CTCF	4232
MYC	930
MYCN	833
Tcf12	666
NFIC	570
TCF4	545
ZEB1	500
SP1	494
TAL1::TCF3	448
MYBL1	348
TCF3	344
NR2F1	332
RUNX3	313
RUNX1	312
STAT3	292
Sox2	286
ZBTB7A	244
Gabpa	241
FOXA1	214
MAX	212
E2F4	211
ELF1	210
ERG	206
TEAD4	191
Esrrg	189
YY1	181
MAX::MYC	164
NR1H2::RXRA	152
TFAP2C	151
TFAP4	150
Arid3a	149
Foxa2	140
TFAP2A	140
Rxra	138
GATA3	136
ELK1	133
ZNF740	123
Pparg::Rxra	121
NEUROD1	118
EGR1	116
Gata1	116
TFAP2A-var.2	116
NFKB1	113
KLF4	110
OTX2	107
TEAD1	106
Ar	106
Nr1h3::Rxra	105
BHLHE41	105
E2F1	105
CEBPB	102
THAP1	94
FOS	93
ZNF263	92
SOX9	91
Hnf4a	90
USF2	85
EBF1	84
STAT1::STAT2	84
PBX1	81
USF1	81
EGR2	80
NKX3-2	79
ETS1	79
PAX5	77
Foxj2	74
ELF3	71
BATF::JUN	70
FOSL2	68
Esrra	68
Gata4	67
CEBPD	64
TFAP2A-var.3	64
RELA	63
GATA2	63
SPI1	63
REL	63
Tcf21	62
TCF7L2	62
NFIA	62
E2F6	59
POU5F1B	58
MAFK	56
E2F3	55
Pou5f1::Sox2	54
BHLHE40	53
CEBPA	52
KLF5	52
NRF1	51
Tcf7	50
SMAD2::SMAD3::SMAD4	50
JUND	49
EOMES	49
Atf3	49
PDX1	49
GATA5	47
FOSL1	46
CREB1	45
Arnt	44
Mafb	43
STAT1	42
HSF1	42
FLI1	41
Foxo1	40
JUN	40
ETV1	39
Atf1	39
CDX2	37
ARNT::HIF1A	37
NFKB2	36
Hand1::Tcf3	35
RARA::RXRA	35
FOXP1	34
HNF4G	33
BCL6B	33
ELK4	32
FOS::JUN	32
Vdr	32
HEY1	32
TEAD2	32
KLF9	31
RUNX2	30
ETV3	30
TP63	29
ETV6	29
Nkx3-1	29
Stat5a::Stat5b	28
Bcl6	28
MYBL2	28
Klf1	27
SP4	27
MYB	26
TP53	25
MAFF	25
MEF2B	24
MEF2A	24
Gfi1b	23
GATA1::TAL1	23
KLF13	23
SCRT1	23
NFE2	22
Nfe2l2	21
MAF::NFE2	21
SP3	21
NFATC3	19
Ahr::Arnt	19
Bach1::Mafk	19
POU2F2	19
MAFG	19
TBX1	18
NFIL3	17
ERF	17
NFYB	17
IRF1	17
NR4A2	16
ZNF143	16
PRDM1	16
ZBTB18	15
FOXP3	15
BATF3	15
NR3C2	15
REST	14
ELK3	14
ATF4	14
SRF	13
HINFP	11
JUNB	11
FEV	11
PPARG	10
Dux	10
SPIB	10
ELF5	10
DUX4	10
NFYA	9
Hic1;	9
GLI2	9
GRHL1	8
EGR4	8
SREBF2	8
NFATC1	8
Ddit3::Cebpa	8
SREBF1	7
RFX5	7
SNAI2	7
SP2	7
RXRG	6
Srebf1(var.2)	6
Arntl	6
RXRB	6
XBP1	5
HNF1B	5
NR3C1	5
Mecom	4
EGR3	4
TFDP1	4
Ascl2	4
MEF2D	4
Sox17	4
Rarb	4
PROX1	4
NR2C2	4
Gmeb1	3
FOXH1	3
Rarg	3
MAFG::NFE2L1	3
RARA	2
Pax6	2
RORA	2
TBX19	2
RXRA::VDR	2
MEIS1	2
TP73	2
CREB3L1	2
GMEB2	2
RORA(var.2)	2
Arx	1
Alx4	1
ETV4	1
Hes1	1
Hoxa9	1
TFE3	1
HNF1A	1
CREB3	1
Creb3l2	1
HES5	1
Nr5a2	1
SMAD3	1
E2F8	1
Rfx1	1
RFX2	1