NAIK Genome Database

experiment name	hs_brainrhabdoidtumorde_BT16_undef_SMARCA4_SRX1123854	number of peaks	9840
antibody	SMARCA4
cell line	BT16	Number of reads	16740233
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	2240
MYC	760
Sox2	747
MYCN	709
SP1	659
Tcf12	605
NFIC	601
TCF4	530
ZEB1	502
ERG	501
MYBL1	495
TAL1::TCF3	484
FOS	476
NR2F1	455
ZBTB7A	430
STAT3	429
Gabpa	409
BATF::JUN	399
Esrrg	397
TCF3	377
FOSL2	370
E2F4	361
ELF1	344
TEAD4	341
JUND	340
JUN	335
FOSL1	325
E2F1	325
ELK1	321
FOS::JUN	318
RUNX1	310
ZNF740	302
Atf3	300
PBX1	299
CEBPB	275
FOXA1	263
TFAP2A	259
TEAD1	257
MAX	255
RUNX3	243
EGR1	238
TFAP2A-var.2	238
TFAP2C	227
ETS1	222
YY1	209
EGR2	200
Rxra	196
NR1H2::RXRA	195
Pparg::Rxra	194
KLF4	189
CEBPA	183
Foxa2	179
SOX9	179
NFKB1	178
Ar	174
RELA	169
MAX::MYC	168
Gata1	164
ETV1	164
ZNF263	162
KLF5	162
BHLHE41	161
NFE2	156
Arid3a	154
GATA3	154
Hnf4a	149
Esrra	149
CEBPD	144
ELK4	142
OTX2	142
Nfe2l2	141
NEUROD1	139
TFAP4	139
JUNB	136
STAT1::STAT2	132
FLI1	131
TCF7L2	124
REL	123
NRF1	122
ETV3	117
Nr1h3::Rxra	117
GATA2	115
NFIA	114
MAF::NFE2	113
EBF1	113
USF2	112
SPI1	112
HEY1	109
Tcf7	109
Tcf21	108
BHLHE40	108
E2F6	107
ETV6	106
NKX3-2	102
ELF3	101
TP63	100
Gata4	99
Foxj2	99
TFAP2A-var.3	99
ERF	97
THAP1	96
TFDP1	96
USF1	94
KLF9	94
NFKB2	92
PAX5	91
Bach1::Mafk	91
SP3	90
MAFF	89
ATF4	88
E2F3	88
Pou5f1::Sox2	87
MAFK	86
Foxo1	86
ELK3	85
MAFG	83
GATA5	83
POU5F1B	82
Mafb	79
Klf1	77
SMAD2::SMAD3::SMAD4	77
HSF1	74
PDX1	73
CREB1	70
Arnt	65
TEAD2	64
BCL6B	63
CDX2	63
Hand1::Tcf3	61
STAT1	60
Atf1	58
HNF4G	58
NFYB	58
NFIL3	55
FEV	55
NR3C2	54
REST	54
RUNX2	52
MYB	52
MEF2B	52
RARA::RXRA	49
Bcl6	49
EOMES	48
SP4	47
Stat5a::Stat5b	46
NFYA	45
GATA1::TAL1	43
SP2	42
MYBL2	41
ARNT::HIF1A	41
FOXP1	41
Gfi1b	40
NFATC3	40
NR4A2	40
Ddit3::Cebpa	38
Vdr	37
MEF2A	34
Nkx3-1	33
TP53	33
EGR4	32
Ahr::Arnt	29
SCRT1	26
BATF3	26
PRDM1	25
SPIB	25
FOXP3	25
MAFG::NFE2L1	25
KLF13	23
TBX1	22
IRF1	22
ZBTB18	22
FOXH1	21
RXRB	20
Sox17	20
ZNF143	20
ETV4	20
RXRG	19
GMEB2	19
Gmeb1	19
XBP1	18
Hic1;	18
TP73	17
HINFP	17
SNAI2	17
Dux	16
NFATC1	16
HNF1B	16
Arntl	15
SRF	15
PPARG	15
Rarg	15
NR2C2	13
GLI2	12
POU2F2	11
Mecom	11
EGR3	11
SREBF1	10
NR3C1	10
BARX1	10
ZBTB33	9
Rarb	9
RFX5	9
DUX4	9
Ascl2	9
GRHL1	9
ELF5	9
RXRA::VDR	8
SREBF2	8
TBX19	8
Srebf1(var.2)	8
MEIS1	7
RORA(var.2)	6
HNF1A	6
CREB3L1	6
MEF2D	4
CREB3	3
FOS::JUND	3
CLOCK	3
HOXA13	3
Pax6	3
HSF2	3
Hoxa9	3
Hes1	3
HOXA5	3
FOS::JUNB	2
LEF1	2
RFX2	2
Id2	2
RORA	2
Pitx1	2
Arx	2
NFAT5	2
MIXL1	1
Creb3l2	1
E2F2	1
Hes2	1
POU3F2	1
FOXO4	1
HOXB13	1
Hoxa11	1
E2F8	1
Alx4	1
Nr5a2	1
RARA	1
PROX1	1
ISX	1
SMAD3	1
TFE3	1

Motif name

Number of overlap

2240

760

747

709

659