NAIK Genome Database

experiment name	hs_Lymphoblastoid_GM10847_undef_SMC1A_SRX1003366	number of peaks	22072
antibody	SMC1A
cell line	GM10847	Number of reads	35993055
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	5990
MYC	1962
MYCN	1751
Tcf12	1546
SP1	1419
TCF4	1397
TAL1::TCF3	1191
ZEB1	1131
NFIC	1013
TCF3	941
NR2F1	829
MYBL1	807
ZBTB7A	718
E2F4	681
RUNX1	671
RUNX3	616
ERG	607
Gabpa	605
STAT3	586
E2F1	565
Sox2	561
ZNF740	554
ELF1	545
Esrrg	521
MAX	506
TFAP2A-var.2	468
TFAP2A	460
ELK1	454
TFAP2C	454
EGR1	453
YY1	410
MAX::MYC	374
NR1H2::RXRA	352
TFAP4	350
ETS1	344
EGR2	342
NFKB1	336
FOXA1	333
BHLHE41	328
Rxra	319
Pparg::Rxra	310
FOS	284
EBF1	278
NEUROD1	273
TEAD4	271
KLF4	264
PBX1	254
NRF1	254
BATF::JUN	251
ZNF263	250
Gata1	247
STAT1::STAT2	235
ETV6	233
GATA3	228
REL	227
Ar	221
TFAP2A-var.3	220
E2F6	218
Foxa2	218
Esrra	216
SPI1	215
USF2	213
ETV1	211
PAX5	209
KLF5	208
Nr1h3::Rxra	208
FOSL2	205
Hnf4a	199
Atf3	198
Tcf21	196
THAP1	196
Arid3a	191
RELA	190
USF1	190
SOX9	185
OTX2	185
CEBPB	180
JUND	179
FOSL1	176
TEAD1	175
JUN	167
NFKB2	167
BHLHE40	164
ELF3	161
GATA2	161
FLI1	153
NFIA	152
E2F3	150
Gata4	149
ELK4	143
FOS::JUN	139
TCF7L2	135
SMAD2::SMAD3::SMAD4	130
Klf1	128
MYB	124
KLF9	123
Hand1::Tcf3	123
SP3	122
NKX3-2	120
CEBPD	120
Tcf7	119
ELK3	119
Foxj2	117
CREB1	116
GATA5	113
POU5F1B	110
RUNX2	110
ETV3	110
Arnt	108
CEBPA	108
SP4	105
Atf1	102
ERF	101
TFDP1	101
STAT1	100
PDX1	98
RARA::RXRA	96
HSF1	96
HEY1	93
MAFK	91
Foxo1	87
HNF4G	86
Mafb	83
ARNT::HIF1A	81
NFE2	76
Pou5f1::Sox2	76
EOMES	75
BCL6B	74
TP63	74
Stat5a::Stat5b	73
SP2	73
TEAD2	73
CDX2	68
FEV	67
MAFF	66
Vdr	63
NFATC3	63
Bcl6	61
MAF::NFE2	61
Bach1::Mafk	61
Nfe2l2	61
GATA1::TAL1	58
NFYB	57
JUNB	56
MYBL2	53
MEF2B	50
SNAI2	50
MAFG	49
KLF13	48
BATF3	47
Gfi1b	46
EGR4	46
NFYA	46
MEF2A	46
NR3C2	45
NFATC1	44
FOXP1	44
IRF1	42
SCRT1	42
Ahr::Arnt	42
TP53	42
ZNF143	41
TBX1	41
PRDM1	40
NR4A2	36
ZBTB18	34
HINFP	34
ATF4	32
POU2F2	32
Nkx3-1	30
SPIB	30
Hic1;	28
NFIL3	28
SRF	27
SREBF2	26
FOXP3	26
Ddit3::Cebpa	24
REST	24
RXRB	23
RXRG	23
XBP1	22
EGR3	20
PPARG	20
Arntl	20
Gmeb1	18
RFX5	18
GMEB2	18
ELF5	18
FOXH1	18
NR3C1	18
SREBF1	17
MEIS1	15
Ascl2	13
GRHL1	13
GLI2	12
ETV4	11
HNF1B	11
RXRA::VDR	11
ZBTB33	11
Sox17	11
Mecom	10
Rarg	9
NR2C2	9
Dux	9
CREB3	9
CLOCK	8
TP73	7
MEF2D	7
Srebf1(var.2)	7
Rarb	6
PROX1	6
DUX4	6
MAFG::NFE2L1	6
SMAD3	5
CREB3L1	5
RORA(var.2)	5
Nr5a2	4
RARA	4
LEF1	4
Hes1	3
Pax6	3
RORA	3
TBX19	3
Alx4	3
Hoxa9	3
BARX1	2
HNF1A	2
HSF2	2
MIXL1	2
FOS::JUND	2
NFIC::TLX1	2
Creb3l2	2
FOS::JUNB	1
NKX2-3	1
Nkx2-5-var.2	1
Rfx1	1
IRF9	1

Motif name

Number of overlap

5990

1962

1751

1546

1419