NAIK Genome Database

experiment name	hs_Lymphoblastoid_GM10847_undef_SMC1A_SRX1003365	number of peaks	19173
antibody	SMC1A
cell line	GM10847	Number of reads	30760923
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	7601
MYC	2282
MYCN	2028
Tcf12	1817
TCF4	1575
SP1	1556
TAL1::TCF3	1359
NFIC	1229
ZEB1	1213
TCF3	1083
MYBL1	1052
NR2F1	893
RUNX1	891
RUNX3	833
ERG	826
ZBTB7A	788
E2F4	769
Sox2	769
STAT3	751
Gabpa	737
Esrrg	687
ELF1	638
MAX	637
ZNF740	609
ELK1	606
E2F1	601
FOXA1	494
YY1	490
TFAP2A-var.2	465
EGR1	443
TFAP2A	443
TFAP2C	427
ETS1	413
MAX::MYC	412
TFAP4	396
EGR2	392
NR1H2::RXRA	388
Rxra	370
Pparg::Rxra	365
Gata1	353
BHLHE41	341
STAT1::STAT2	332
ETV6	331
NFKB1	330
Foxa2	327
FOS	327
GATA3	325
SPI1	321
TEAD4	316
NEUROD1	308
Arid3a	308
PBX1	296
PAX5	291
KLF4	287
NRF1	283
USF2	278
BATF::JUN	274
Ar	269
CEBPB	269
EBF1	264
ETV1	256
Nr1h3::Rxra	253
ZNF263	249
Esrra	243
KLF5	240
GATA2	239
TFAP2A-var.3	235
SOX9	226
ELF3	226
USF1	221
BHLHE40	221
Tcf21	220
E2F6	217
THAP1	212
OTX2	210
REL	210
FOSL2	208
Hnf4a	207
ELK4	205
Atf3	202
JUND	196
RELA	191
FLI1	187
Gata4	184
NFIA	183
FOSL1	181
E2F3	181
TEAD1	173
Foxj2	169
NKX3-2	162
JUN	161
MYB	157
CREB1	156
NFKB2	155
CEBPD	155
CEBPA	149
TCF7L2	148
POU5F1B	147
SMAD2::SMAD3::SMAD4	147
ETV3	144
Hand1::Tcf3	140
GATA5	140
Atf1	139
KLF9	138
Tcf7	138
PDX1	137
ELK3	135
Arnt	133
ERF	133
FOS::JUN	132
STAT1	129
TFDP1	128
Foxo1	128
Pou5f1::Sox2	126
Klf1	125
MAFK	122
SP3	121
SP4	118
HEY1	115
Mafb	111
CDX2	111
RUNX2	109
MEF2B	105
ARNT::HIF1A	102
NFATC1	100
Vdr	98
Stat5a::Stat5b	98
EOMES	95
HSF1	94
BCL6B	94
RARA::RXRA	94
IRF1	91
MEF2A	90
TP63	90
SP2	88
NFE2	87
HNF4G	81
MAFF	77
MAF::NFE2	77
FOXP1	76
GATA1::TAL1	76
POU2F2	74
TEAD2	74
Bcl6	72
Bach1::Mafk	72
BATF3	71
NFATC3	68
Nfe2l2	68
NFYB	64
MYBL2	62
FEV	62
TBX1	61
MAFG	61
PRDM1	60
NR4A2	59
EGR4	59
KLF13	58
Gfi1b	56
NFYA	54
ZBTB18	53
Ahr::Arnt	53
SCRT1	51
JUNB	51
NR3C2	48
Nkx3-1	47
ZNF143	47
FOXP3	47
SNAI2	47
TP53	46
ATF4	42
NFIL3	41
SRF	39
XBP1	39
PPARG	37
SPIB	34
NR3C1	34
Gmeb1	34
SREBF2	34
HINFP	32
HNF1B	31
Arntl	29
Ddit3::Cebpa	29
EGR3	29
Hic1;	27
REST	25
SREBF1	24
Dux	24
FOXH1	23
GMEB2	22
RXRB	21
RFX5	20
TP73	17
GRHL1	17
ELF5	17
RXRG	16
DUX4	15
Srebf1(var.2)	14
RXRA::VDR	14
MEIS1	14
MEF2D	12
CLOCK	11
LEF1	11
Mecom	11
Rarg	11
ZBTB33	11
Sox17	11
MAFG::NFE2L1	10
Rarb	10
NR2C2	10
GLI2	10
CREB3L1	10
Ascl2	9
RORA(var.2)	9
ETV4	8
Nr5a2	8
RORA	7
PROX1	6
Pax6	5
HNF1A	5
TBX19	4
SMAD3	3
CREB3	3
TFE3	3
Rfx1	3
MIXL1	2
NFIC::TLX1	2
Alx4	2
RFX2	2
Arx	2
RARA	2
Creb3l2	2
HOXA5	2
Id2	2
Hes1	2
FOS::JUND	1
Pitx1	1
BARX1	1
Hoxa11	1
HES5	1
HOXA13	1
Stat6	1
FOSB::JUN	1
Hoxa9	1

Motif name

Number of overlap

7601

2282

2028

1817

1575