NAIK Genome Database

experiment name	hs_LungFibroblast_WI38_normal_CTCF_SRX189084	number of peaks	20168
antibody	CTCF	link to motif view if antibody and consensus motif is the same
cell line	WI38	Number of reads	7962338
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	6225
MYC	1636
MYCN	1524
Tcf12	1291
SP1	1179
TCF4	1056
ZEB1	918
NFIC	901
TAL1::TCF3	896
TCF3	710
NR2F1	677
ZBTB7A	622
E2F4	580
MYBL1	544
E2F1	473
Sox2	457
RUNX3	453
TFAP2A-var.2	450
ZNF740	449
STAT3	447
RUNX1	447
TFAP2A	408
TFAP2C	403
MAX	381
Gabpa	377
ERG	373
EGR1	366
ELF1	343
Esrrg	333
EGR2	310
ELK1	296
YY1	296
FOXA1	282
MAX::MYC	279
NR1H2::RXRA	275
TFAP4	266
NEUROD1	262
Rxra	247
Pparg::Rxra	243
BHLHE41	241
TEAD4	239
ZNF263	226
Nr1h3::Rxra	221
TFAP2A-var.3	218
KLF4	206
EBF1	203
Foxa2	201
NFKB1	197
THAP1	191
OTX2	184
NRF1	180
E2F6	178
FOS	169
Ar	167
ETS1	164
GATA3	164
KLF5	163
Arid3a	163
Tcf21	162
USF2	160
Gata1	153
TEAD1	152
Hnf4a	150
E2F3	150
BHLHE40	149
PBX1	148
USF1	145
PAX5	141
Esrra	136
STAT1::STAT2	133
SMAD2::SMAD3::SMAD4	127
CEBPB	127
NFIA	127
FOSL2	126
BATF::JUN	123
ETV1	122
NKX3-2	116
Atf3	112
GATA2	112
SOX9	112
REL	111
Gata4	108
RELA	107
Foxj2	107
FOSL1	106
ELF3	106
JUND	104
KLF9	103
SPI1	103
Klf1	97
SP4	92
FLI1	92
POU5F1B	88
SP3	88
CEBPD	86
TCF7L2	86
ELK4	84
CREB1	83
JUN	83
FOS::JUN	80
RUNX2	79
Tcf7	79
Arnt	78
MAFK	77
GATA5	77
NFKB2	74
TFDP1	73
Foxo1	72
Hand1::Tcf3	72
Mafb	70
CEBPA	69
PDX1	68
ETV3	68
RARA::RXRA	67
ELK3	65
Atf1	65
Pou5f1::Sox2	65
TEAD2	65
HEY1	64
EOMES	60
STAT1	60
HSF1	59
ARNT::HIF1A	59
TP63	59
BCL6B	56
ETV6	55
KLF13	55
HNF4G	51
Vdr	50
ERF	49
MAFF	48
NFE2	47
FOXP1	47
MYBL2	46
CDX2	46
Nfe2l2	43
Bcl6	42
MYB	42
NFATC3	42
Stat5a::Stat5b	41
Bach1::Mafk	41
MAF::NFE2	40
GATA1::TAL1	38
EGR4	36
SNAI2	36
NR4A2	35
SP2	33
MEF2B	33
ZNF143	33
JUNB	33
MAFG	32
BATF3	32
FEV	32
NR3C2	32
Gfi1b	30
Nkx3-1	29
TBX1	28
MEF2A	28
Ahr::Arnt	28
NFYB	28
SCRT1	27
NFYA	27
TP53	27
Hic1;	26
FOXP3	24
EGR3	24
ZBTB18	24
REST	22
SRF	22
SPIB	20
ATF4	20
PPARG	19
HINFP	19
NFATC1	17
FOXH1	16
PRDM1	15
XBP1	15
ELF5	14
NFIL3	14
POU2F2	14
Ascl2	14
SREBF2	13
Ddit3::Cebpa	13
RXRB	12
RFX5	12
RXRG	11
GLI2	10
Rarg	10
IRF1	9
Dux	9
TP73	8
ZBTB33	8
ETV4	8
Arntl	8
NR3C1	7
Sox17	7
Gmeb1	7
Pax6	6
HNF1B	6
GRHL1	6
Rarb	6
SREBF1	6
Mecom	5
CREB3L1	5
RXRA::VDR	5
Srebf1(var.2)	5
NR2C2	5
DUX4	5
MEIS1	4
GMEB2	4
Nr5a2	3
PROX1	3
TBX19	3
RORA(var.2)	3
Hes1	3
RARA	2
Pitx1	2
MEF2D	2
SMAD3	2
TFE3	2
Creb3l2	2
CLOCK	2
MAFG::NFE2L1	2
Nkx2-5-var.2	1
RORA	1
RFX2	1
LEF1	1
POU3F2	1
HNF1A	1
CREB3	1
Rfx1	1
Arx	1
E2F2	1
Alx4	1
NKX2-3	1
MIXL1	1
Hoxa9	1
HSF2	1
BARX1	1
IRF2	1
NFIC::TLX1	1

Motif name

Number of overlap

6225

1636

1524

1291

1179