NAIK Genome Database

experiment name	hs_LungCarcinoma_SCLCH345_cancer_SMAD2SMAD3_SRX796409	number of peaks	22498
antibody	SMAD2SMAD3
cell line	SCLCH345	Number of reads	4969122
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Overlapping motifs:

Motif name	Number of overlap
FOXA1	1284
Foxa2	1062
Sox2	556
BHLHE41	474
SMAD2::SMAD3::SMAD4	375
Ar	327
Tcf12	300
TFAP2A	294
NFIC	277
ERG	275
FOS	273
MYC	271
TAL1::TCF3	242
TCF4	241
SP1	219
TFAP2C	202
TCF3	197
MAX	196
MYCN	196
Esrrg	191
Gabpa	190
GATA3	179
FOSL2	174
ELF1	169
TP63	166
BATF::JUN	161
TFAP2A-var.2	161
JUND	160
NKX3-2	158
PBX1	152
STAT3	149
MYBL1	147
ZNF740	144
NR2F1	138
CEBPB	132
ZBTB7A	132
ELK1	131
Nkx3-1	129
NEUROD1	127
JUN	126
E2F4	124
FOSL1	124
CTCF	122
FOS::JUN	122
RUNX1	121
E2F1	120
Foxj2	118
NFIA	116
PDX1	115
Gata4	114
ZEB1	111
ETS1	109
EBF1	108
EGR1	108
Esrra	107
EGR2	99
Atf3	97
GATA2	95
KLF4	92
YY1	89
Gata1	89
TCF7L2	88
MAX::MYC	85
OTX2	85
ETV1	84
Tcf7	82
CDX2	76
SOX9	76
Pou5f1::Sox2	74
GATA5	74
TEAD4	74
ELF3	74
USF1	72
KLF5	71
RUNX3	69
MYBL2	68
Mafb	67
TFAP4	67
Foxo1	67
ELK4	66
NFKB1	65
MEF2B	65
Hnf4a	64
USF2	63
ZNF263	62
FOXP1	61
CEBPA	60
BHLHE40	60
Tcf21	58
ETV3	57
ERF	56
Klf1	55
ELK3	54
NRF1	52
TFAP2A-var.3	51
TEAD1	51
TFDP1	50
TP73	50
Rxra	49
RELA	48
Nfe2l2	46
SPI1	46
MAFK	45
SP3	45
NFE2	45
Hand1::Tcf3	44
Arnt	44
NR1H2::RXRA	43
REL	42
GATA1::TAL1	42
FLI1	42
MAF::NFE2	41
ETV6	41
NR3C2	40
POU5F1B	40
SMAD3	40
PAX5	39
Pparg::Rxra	39
KLF9	38
CEBPD	38
JUNB	38
CREB1	37
EOMES	34
E2F6	34
HEY1	33
MAFF	33
TP53	33
Sox17	32
Arid3a	32
ARNT::HIF1A	31
FEV	30
NFKB2	30
Atf1	29
MAFG	26
NFYB	26
STAT1::STAT2	26
ATF4	25
Dux	25
THAP1	25
NFYA	23
HNF4G	22
SP2	22
Bach1::Mafk	21
HNF1B	21
MEF2A	21
DUX4	20
RUNX2	20
Pax6	19
Ahr::Arnt	18
NR4A2	18
NFATC3	18
BATF3	17
MYB	17
SNAI2	17
ZNF143	17
GRHL1	16
NFIL3	16
SP4	15
Gmeb1	15
E2F3	15
XBP1	15
HSF1	15
FOXH1	15
EGR4	14
SCRT1	14
SRF	14
Hic1;	14
STAT1	13
PRDM1	13
NR3C1	13
Gfi1b	12
Stat5a::Stat5b	12
Nr1h3::Rxra	11
Bcl6	10
Ddit3::Cebpa	10
FOXP3	10
BCL6B	10
Mecom	10
Arntl	9
EGR3	9
POU2F2	9
RARA::RXRA	9
TEAD2	8
REST	8
GMEB2	8
SPIB	8
ETV4	8
RFX5	7
MEF2D	7
HOXA13	7
Vdr	6
ZBTB33	6
BARX1	6
HINFP	6
Nr5a2	6
KLF13	5
IRF1	5
RXRG	5
RXRB	5
Rarb	4
ELF5	4
LEF1	4
TBX1	4
GLI2	4
NR2C2	4
NFATC1	4
Arx	3
HNF1A	3
Srebf1(var.2)	3
CREB3L1	3
SREBF2	3
RXRA::VDR	3
MEIS1	3
MAFG::NFE2L1	3
CLOCK	3
FOS::JUND	2
Ascl2	2
SREBF1	2
Rarg	2
TBX19	2
RORA(var.2)	2
ZBTB18	2
ISL2	1
MIXL1	1
Nkx2-5-var.2	1
FOXO4	1
Pitx1	1
IRF2	1
NFIC::TLX1	1
Stat4	1
POU3F2	1
CREB3	1
Hoxa9	1
Sox1	1
E2F2	1
TFE3	1
FOS::JUNB	1
Rfx1	1