NAIK Genome Database

experiment name	hs_LungCarcinoma_A549_cancer_CTCF_SRX199868	number of peaks	37212
antibody	CTCF	link to motif view if antibody and consensus motif is the same
cell line	A549	Number of reads	10289552
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Overlapping motifs:

Motif name	Number of overlap
CTCF	2876
MYC	826
MYCN	760
Tcf12	659
TCF4	577
SP1	568
ZEB1	491
TAL1::TCF3	489
NFIC	397
TCF3	376
NR2F1	327
ZBTB7A	298
E2F4	259
TFAP2C	245
ZNF740	242
STAT3	208
MYBL1	206
TFAP2A-var.2	196
TFAP2A	196
MAX	189
RUNX1	188
RUNX3	188
Gabpa	180
E2F1	177
ERG	169
Sox2	165
EGR1	160
Esrrg	158
TFAP4	156
ELF1	151
ELK1	150
MAX::MYC	148
NEUROD1	141
BHLHE41	140
EGR2	139
ZNF263	130
YY1	130
NR1H2::RXRA	128
Rxra	109
Nr1h3::Rxra	104
TEAD4	104
THAP1	103
TFAP2A-var.3	103
KLF4	101
E2F6	101
Pparg::Rxra	98
NRF1	96
NFKB1	89
USF2	85
Tcf21	85
EBF1	85
Ar	83
FOXA1	82
PAX5	76
OTX2	74
TEAD1	74
KLF5	72
USF1	71
Gata1	70
NFIA	69
ETS1	68
Hnf4a	67
SMAD2::SMAD3::SMAD4	65
Esrra	64
E2F3	63
STAT1::STAT2	62
Foxa2	61
SOX9	59
GATA3	58
BHLHE40	57
ETV1	55
FOS	52
SP4	51
FLI1	51
PBX1	49
SPI1	48
BATF::JUN	47
Klf1	45
FOSL2	45
Atf3	44
Gata4	44
GATA5	44
CEBPB	42
FOSL1	41
POU5F1B	40
REL	40
SP3	40
ETV6	39
ELF3	37
KLF9	37
HEY1	37
ETV3	36
TEAD2	35
CEBPD	35
JUN	35
Hand1::Tcf3	35
JUND	35
Arnt	34
GATA2	34
RELA	34
Arid3a	34
RARA::RXRA	34
TCF7L2	34
CEBPA	33
RUNX2	32
ELK4	32
HSF1	32
HNF4G	32
Foxj2	32
TFDP1	31
EOMES	31
KLF13	31
NFKB2	31
Pou5f1::Sox2	30
TP63	30
FOS::JUN	29
Tcf7	29
NKX3-2	29
MYB	28
Atf1	27
STAT1	26
PDX1	26
Foxo1	25
Stat5a::Stat5b	25
ARNT::HIF1A	23
ELK3	23
MAFK	22
ERF	20
Vdr	20
EGR4	20
BCL6B	19
NR4A2	19
CREB1	19
Mafb	18
SCRT1	18
Bcl6	18
Bach1::Mafk	17
SNAI2	17
ZNF143	17
ZBTB18	16
FOXP1	16
TP53	15
Nfe2l2	15
NFATC3	15
GATA1::TAL1	15
MAF::NFE2	14
NFE2	14
FEV	14
HINFP	14
SP2	13
MYBL2	12
Gfi1b	12
MAFF	11
NR3C2	11
FOXH1	11
JUNB	10
EGR3	10
Ascl2	10
SRF	10
MAFG	10
TBX1	10
REST	9
CDX2	9
Ddit3::Cebpa	9
PPARG	9
ELF5	9
Hic1;	9
RXRB	9
POU2F2	8
NFATC1	8
PRDM1	8
XBP1	8
BATF3	8
RXRG	7
IRF1	7
ATF4	7
Arntl	7
Rarg	7
Sox17	7
Ahr::Arnt	6
NFYB	6
NFIL3	6
NFYA	6
Nkx3-1	6
MEF2B	5
GLI2	5
SREBF1	5
MEF2A	5
TP73	5
NR3C1	5
SPIB	5
Rarb	4
SREBF2	4
RXRA::VDR	4
FOXP3	4
RFX5	4
NR2C2	4
SMAD3	3
RARA	3
GRHL1	3
Mecom	3
Nr5a2	3
Gmeb1	3
ZBTB33	3
Dux	2
NFIC::TLX1	2
CLOCK	2
MAFG::NFE2L1	2
FOS::JUND	2
ETV4	2
CREB3L1	2
MEIS1	2
LEF1	2
HNF1B	2
Creb3l2	1
GMEB2	1
MIXL1	1
Srebf1(var.2)	1
TFE3	1
PROX1	1
Pitx1	1
TBX19	1
DUX4	1