NAIK Genome Database

experiment name	hs_LiverCancer_SMMC7721_cancer_PBX3_SRX1116394	number of peaks	46057
antibody	PBX3
cell line	SMMC7721	Number of reads	26880259
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
PBX1	4325
FOS	2197
FOSL2	1569
BATF::JUN	1561
JUND	1537
JUN	1275
FOSL1	1245
FOXA1	1230
FOS::JUN	1194
Ar	1074
Atf3	1018
Gata4	999
GATA3	968
NR2F1	964
Gata1	937
Foxa2	934
Sox2	933
MAX	872
GATA2	856
ERG	821
MYC	812
RUNX1	710
Esrrg	703
Tcf12	691
NFIC	645
TAL1::TCF3	640
MYCN	636
Gabpa	594
TCF3	572
GATA5	572
TEAD4	537
CEBPB	527
ELF1	512
TCF4	478
TEAD1	469
Esrra	460
STAT3	451
TP63	440
USF1	439
JUNB	429
NFE2	420
TFAP2A	407
TCF7L2	403
SP1	392
MYBL1	390
Nfe2l2	389
Tcf7	373
CREB1	369
CTCF	361
USF2	354
SPI1	346
MAFK	330
MAX::MYC	329
RUNX3	328
Hnf4a	316
Tcf21	306
MAFG	301
GATA1::TAL1	300
MAF::NFE2	299
CEBPA	294
Mafb	290
MAFF	287
OTX2	279
ELF3	269
CDX2	269
KLF4	267
ZBTB7A	257
YY1	254
TFAP4	252
Dux	252
TFAP2A-var.2	248
TFAP2C	246
NEUROD1	245
Pou5f1::Sox2	220
ETS1	218
FLI1	215
NR3C2	214
ZNF263	213
Rxra	213
EBF1	210
BHLHE40	210
Pparg::Rxra	204
BHLHE41	203
POU5F1B	199
NR1H2::RXRA	192
Foxj2	188
Foxo1	184
NFKB1	181
Bach1::Mafk	180
CEBPD	174
SMAD2::SMAD3::SMAD4	171
PDX1	168
ETV3	162
SOX9	157
DUX4	157
Atf1	157
BATF3	154
STAT1::STAT2	150
MEF2B	150
ZNF740	150
ELK1	144
PAX5	143
ZEB1	143
ATF4	142
Arnt	142
ETV6	141
E2F4	139
RELA	138
NKX3-2	137
NFIA	136
RUNX2	135
Gfi1b	135
REL	135
EGR1	134
HEY1	131
ETV1	130
ARNT::HIF1A	121
Hand1::Tcf3	118
E2F1	117
EOMES	111
EGR2	111
MYB	104
MYBL2	102
TP73	101
TP53	94
Arid3a	92
KLF9	89
HNF4G	82
KLF5	80
NFYB	80
PRDM1	80
E2F6	79
NRF1	79
NFYA	78
Stat5a::Stat5b	77
TFAP2A-var.3	75
NFKB2	74
Nr1h3::Rxra	74
FOXP1	72
Klf1	71
ERF	70
MEF2A	66
NFIL3	65
Ddit3::Cebpa	62
HSF1	61
ELK4	59
SRF	59
Ahr::Arnt	57
SP3	56
MEIS1	53
RARA::RXRA	52
TEAD2	50
TBX1	47
MAFG::NFE2L1	47
Nkx3-1	46
Bcl6	44
HNF1B	44
IRF1	42
FOXH1	42
BCL6B	40
ZNF143	39
SCRT1	39
XBP1	38
STAT1	38
POU2F2	38
NR3C1	33
Vdr	33
NFATC1	32
SPIB	31
THAP1	28
ETV4	27
Sox17	27
TFDP1	26
NR4A2	25
SP2	25
REST	23
ZBTB18	23
RXRB	21
Mecom	21
Pax6	20
FOXP3	19
RXRG	19
ELK3	19
Hic1;	18
FEV	17
LEF1	15
EGR4	15
GRHL1	15
MEF2D	15
Gmeb1	15
NFATC3	14
SP4	14
E2F3	13
Hoxa9	13
TBX19	12
RFX5	12
SMAD3	12
SREBF1	11
HINFP	10
HNF1A	10
ZBTB33	10
Srebf1(var.2)	9
PPARG	9
FOS::JUNB	9
RXRA::VDR	9
FOS::JUND	8
SREBF2	7
CREB3	7
Rarg	7
Arntl	6
GMEB2	6
BARX1	6
FOSB::JUN	5
NR2C2	5
FOS::JUN(var.2)	5
ELF5	5
RORA(var.2)	5
CREB3L1	4
RARA	4
EGR3	4
HOXA13	4
GLI2	4
SNAI2	3
Nr5a2	3
CLOCK	3
Rfx1	3
Rarb	3
KLF13	3
Ascl2	3
Arx	2
HOXA5	2
PAX3	2
DBP	2
RFX2	2
FOXO4	2
PROX1	2
ESR1	1
Hes1	1
RORA	1
Pitx1	1
Myod1	1
Id2	1
TFE3	1
Klf12	1
MIXL1	1
Hoxa11	1
Sox1	1

Motif name

Number of overlap

4325

2197

1569

1561

1537