NAIK Genome Database

experiment name	hs_HepatocellularCarcinoma_HepG2_cancer_SP2_SRX190243	number of peaks	8631
antibody	SP2	link to motif view if antibody and consensus motif is the same
cell line	HEPG2	Number of reads	56235204
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
SP1	1134
NFYA	941
NFYB	900
ELK1	862
SP2	819
E2F1	788
ERG	739
ELF1	728
SOX9	700
Gabpa	680
E2F4	673
ETS1	589
CTCF	573
ZBTB7A	535
ELK4	452
NR2F1	406
ZNF740	390
MYCN	385
FOXA1	383
KLF5	379
ETV1	374
MYC	372
MYBL1	367
Esrrg	366
ELK3	362
Hnf4a	346
EGR1	340
ERF	328
Foxa2	327
STAT3	321
SP3	318
NFIC	298
ETV3	292
SP4	280
NR1H2::RXRA	278
Tcf12	275
TFDP1	259
ZEB1	255
Sox2	254
Rxra	253
EGR2	231
KLF4	227
TAL1::TCF3	223
MAX	219
ETV6	212
TCF4	211
CEBPB	209
CEBPA	206
Pparg::Rxra	194
PBX1	187
YY1	181
CEBPD	180
NRF1	175
Atf1	173
HNF4G	173
TCF3	165
Esrra	165
TEAD4	162
RUNX1	160
TFAP2A-var.2	157
ELF3	157
TFAP2A	154
Ar	152
TFAP2C	148
BHLHE40	147
USF2	146
CREB1	146
Gata1	145
MYBL2	143
Klf1	142
E2F3	138
GATA3	136
FOS	132
E2F6	131
RUNX3	130
USF1	129
MAX::MYC	126
Gata4	122
STAT1::STAT2	112
FLI1	109
HEY1	108
FOSL2	108
RELA	107
SPI1	105
GATA5	105
NFKB1	99
GATA2	98
BATF::JUN	97
TEAD1	91
JUND	91
NFATC3	88
NFIA	87
TFAP2A-var.3	86
REL	86
PAX5	84
Atf3	82
JUN	79
KLF9	78
BHLHE41	78
XBP1	77
TFAP4	76
TCF7L2	75
NKX3-2	73
Tcf21	72
THAP1	71
OTX2	71
EBF1	70
FEV	70
Foxj2	69
ZNF263	69
FOS::JUN	67
FOSL1	67
BATF3	66
Tcf7	65
NEUROD1	64
NFIL3	64
MYB	61
Nr1h3::Rxra	61
Arnt	57
Foxo1	56
POU5F1B	56
Stat5a::Stat5b	55
NFKB2	55
STAT1	52
Arid3a	51
SMAD2::SMAD3::SMAD4	50
NR4A2	50
MAFK	50
RUNX2	45
CDX2	43
TP63	43
ARNT::HIF1A	42
GMEB2	42
HSF1	42
Dux	41
ZNF143	40
ZBTB33	39
EGR4	39
BCL6B	38
Gmeb1	38
MAFF	37
PDX1	37
FOXP1	37
Pou5f1::Sox2	37
Rarg	34
NFE2	33
NR3C2	33
Nfe2l2	33
Rarb	33
EOMES	32
RARA::RXRA	32
ATF4	32
TEAD2	30
Hand1::Tcf3	29
SREBF2	29
Mafb	27
Arntl	27
Bcl6	27
Ahr::Arnt	26
JUNB	25
GATA1::TAL1	25
Bach1::Mafk	25
NR2C2	25
Gfi1b	24
ETV4	23
SREBF1	23
MAF::NFE2	23
PRDM1	22
KLF13	21
ELF5	21
Nkx3-1	21
DUX4	20
Ddit3::Cebpa	20
RXRB	20
SPIB	20
SRF	19
MEF2B	18
HNF1B	18
RXRG	18
Vdr	18
MAFG	18
HINFP	18
EGR3	17
NFATC1	17
RFX5	16
POU2F2	16
NR3C1	16
TBX1	15
SCRT1	12
FOXP3	12
Sox17	11
IRF1	11
CREB3	11
BARX1	10
MEIS1	10
CREB3L1	10
Mecom	9
REST	9
SNAI2	8
MEF2A	8
MIXL1	8
Srebf1(var.2)	7
FOXH1	7
TP53	7
HNF1A	6
RFX2	6
RXRA::VDR	6
PPARG	6
TP73	5
Hic1;	5
Pax6	5
HSF2	5
RORA	4
CLOCK	4
RORA(var.2)	4
ZBTB18	4
LEF1	4
TBX19	4
GLI2	3
Klf12	3
MEF2D	3
Ascl2	3
HOXA13	3
GRHL1	3
FOS::JUND	3
RARA	3
Hes1	2
SMAD3	2
NFIC::TLX1	2
TBP	2
Rfx1	2
HOXA5	2
Arx	2
Pitx1	2
MAFG::NFE2L1	2
PROX1	2
Creb3l2	2
FOXO4	1
Alx4	1
ATF7	1
DBP	1
NFAT5	1
Nr5a2	1
ESR1	1
FOS::JUNB	1
Id2	1
ISL2	1
HOXB13	1
ISX	1

Motif name

Number of overlap

1134

941

900

862

819