experiment name
hs_HepatocellularCarcinoma_HepG2_cancer_RAD21_SRX100562
number of peaks
109262
antibody
RAD21
cell line
HEPG2
Number of reads
50512326
sra ftp link
link
SRX search
link
homer denovo motifs
link
Genome view
link
Overlapping motifs:
Motif name
Number of overlap
CTCF
38806
MYC
9264
MYCN
8190
NR2F1
6555
SP1
6409
Tcf12
6121
FOXA1
5450
Hnf4a
5109
TCF4
5014
Foxa2
4618
TAL1::TCF3
4430
ZEB1
4320
NFIC
4120
ZBTB7A
3995
MAX
3869
NR1H2::RXRA
3749
TCF3
3537
Gabpa
3533
ELF1
3489
ZNF740
3254
Sox2
3161
ERG
3101
Rxra
3045
E2F1
2751
HNF4G
2683
CEBPB
2658
CEBPA
2586
TFAP2C
2568
Pparg::Rxra
2567
RUNX1
2561
TEAD4
2528
E2F4
2505
TFAP2A
2456
MAX::MYC
2448
Esrrg
2407
MYBL1
2398
FOS
2365
TFAP2A-var.2
2334
STAT3
2321
EGR1
2248
RUNX3
2159
YY1
2086
CEBPD
1968
FOSL2
1942
ELK1
1839
Gata1
1765
Esrra
1737
JUND
1733
BATF::JUN
1728
USF1
1678
EGR2
1669
Ar
1657
BHLHE41
1639
GATA3
1637
USF2
1619
Gata4
1589
Atf3
1509
MYBL2
1487
ETS1
1457
FOSL1
1418
JUN
1402
TFAP4
1379
TEAD1
1377
PBX1
1353
KLF4
1277
NFKB1
1277
FOS::JUN
1274
GATA2
1250
ZNF263
1183
KLF5
1179
NRF1
1172
BHLHE40
1168
NEUROD1
1160
GATA5
1156
EBF1
1142
Arid3a
1090
TFAP2A-var.3
1080
OTX2
1076
TCF7L2
1071
Nr1h3::Rxra
1010
E2F6
1010
NFIA
1009
Tcf7
981
ETV1
972
HEY1
935
ELF3
905
Tcf21
879
SOX9
820
CREB1
799
SPI1
795
FLI1
754
REL
726
ELK4
672
THAP1
661
MAFK
659
Foxj2
657
RELA
655
STAT1::STAT2
652
NFIL3
644
PAX5
625
NKX3-2
600
SMAD2::SMAD3::SMAD4
579
ERF
577
POU5F1B
566
E2F3
559
MAFF
558
Klf1
547
SP4
547
ELK3
538
RARA::RXRA
533
NFE2
532
NFKB2
531
Arnt
526
Mafb
522
ETV6
522
ETV3
522
Nfe2l2
507
SP3
505
Foxo1
486
TFDP1
479
KLF9
478
TP63
470
Atf1
448
JUNB
448
Ddit3::Cebpa
436
MAF::NFE2
432
Pou5f1::Sox2
430
ARNT::HIF1A
429
GATA1::TAL1
420
Hand1::Tcf3
414
Bach1::Mafk
407
FOXP1
394
EOMES
390
PDX1
387
CDX2
385
RUNX2
380
HNF1B
351
MAFG
345
SP2
330
NR3C2
325
STAT1
310
HSF1
301
ATF4
300
TEAD2
298
BATF3
296
NFATC3
280
Nkx3-1
276
REST
267
MYB
258
SNAI2
255
EGR4
249
Vdr
235
ZNF143
232
BCL6B
227
MEF2B
225
Stat5a::Stat5b
223
NFYB
212
FEV
198
Bcl6
197
Ahr::Arnt
196
XBP1
195
TP53
191
RXRB
189
SCRT1
187
SRF
186
MEF2A
182
PRDM1
181
RXRG
176
KLF13
174
NFYA
172
Gfi1b
159
NR2C2
159
FOXH1
153
IRF1
149
NR4A2
148
Dux
146
POU2F2
136
HINFP
131
HNF1A
125
EGR3
125
FOXP3
112
Sox17
111
Arntl
110
ZBTB18
105
TBX1
103
GMEB2
94
RFX5
91
DUX4
90
SPIB
87
TP73
85
Hic1;
84
NFATC1
80
ETV4
79
MAFG::NFE2L1
78
Gmeb1
76
NR3C1
68
ELF5
68
PPARG
67
SREBF2
67
RXRA::VDR
66
GRHL1
63
ZBTB33
59
Mecom
54
SREBF1
47
MEIS1
44
Ascl2
42
RARA
41
Rarb
39
CLOCK
36
Rarg
36
Pax6
34
CREB3L1
34
GLI2
32
Srebf1(var.2)
28
TBX19
28
LEF1
27
Nr5a2
26
MEF2D
24
RORA(var.2)
20
PROX1
17
SMAD3
15
CREB3
15
Hes1
13
BARX1
13
RFX2
12
FOS::JUND
11
Creb3l2
11
RORA
10
FOS::JUNB
9
Hoxa9
7
E2F8
6
FOXO4
6
NFAT5
6
Id2
5
Rfx1
5
Klf12
5
HOXA13
5
TFE3
4
Pitx1
4
MIXL1
4
HOXA5
4
Alx4
4
FOS::JUN(var.2)
3
PAX3
3
DBP
3
Arx
3
NFIC::TLX1
3
E2F2
2
HSF2
2
HES5
2
Stat4
2
TBP
2
Tcfl5
2
Sox1
2
FOSB::JUN
2
NKX2-8
1
NKX2-3
1
ESR1
1
POU3F2
1
Nkx2-5-var.2
1
ISX
1
IRF9
1
HOXB13
1
IRF2
1