NAIK Genome Database

experiment name	hs_HepatocellularCarcinoma_HepG2_cancer_IRF3_SRX150729	number of peaks	2464
antibody	IRF3
cell line	HEPG2	Number of reads	32846656
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Overlapping motifs:

Motif name	Number of overlap
NFYA	590
NFYB	547
SOX9	413
SP1	310
E2F1	218
E2F4	214
ELK1	165
SP2	163
ZBTB7A	161
MYBL1	157
MYCN	157
MYC	140
ERG	139
ELF1	125
MAX	124
USF2	118
Gabpa	111
BHLHE40	104
USF1	103
STAT3	103
NR2F1	98
Sox2	95
CTCF	92
ETS1	92
TFDP1	91
ELK4	89
FOXA1	87
EGR1	85
FOS	85
KLF5	83
Esrrg	81
ZNF740	81
MAFK	79
SP3	75
PBX1	72
SP4	71
Foxa2	71
KLF4	70
BATF::JUN	68
NFIC	67
JUN	63
ELK3	62
MAFF	61
ZEB1	61
MAFG	60
ETV1	58
JUND	58
FOS::JUN	57
ERF	57
Tcf12	57
EGR2	57
FOSL2	56
Hnf4a	56
TEAD4	54
TCF4	53
NFE2	53
TAL1::TCF3	52
RUNX1	52
Nfe2l2	51
ETV3	51
Atf1	50
Esrra	48
Mafb	48
MAX::MYC	47
CEBPA	46
ETV6	46
FOSL1	45
Klf1	44
FEV	44
MAF::NFE2	43
CEBPB	42
Gata1	42
CREB1	42
Atf3	42
Bach1::Mafk	41
GATA3	41
CEBPD	40
TCF3	39
NRF1	39
XBP1	39
Ar	38
Gata4	37
NR1H2::RXRA	37
Rxra	36
E2F6	36
YY1	35
Foxj2	35
TFAP2A	34
NKX3-2	34
TFAP2A-var.2	33
TFAP2C	33
TEAD1	33
E2F3	33
OTX2	32
PAX5	31
POU5F1B	30
GATA2	30
STAT1::STAT2	30
Pparg::Rxra	30
RELA	29
RUNX3	29
TFAP4	29
HEY1	28
Arnt	27
REL	27
NFIA	26
NR4A2	26
Dux	26
SPI1	25
TCF7L2	25
Arid3a	25
Foxo1	25
GATA5	25
NFKB1	25
MYB	25
GMEB2	24
SREBF1	24
Arntl	24
EBF1	23
Rarg	23
Tcf7	23
Rarb	23
ELF3	22
BATF3	21
Gmeb1	20
Pou5f1::Sox2	20
THAP1	19
RUNX2	19
KLF9	19
NFATC3	19
JUNB	19
Tcf21	19
CDX2	18
TEAD2	18
ZNF263	18
MYBL2	18
DUX4	18
HNF4G	17
NFKB2	17
PDX1	17
HSF1	17
Stat5a::Stat5b	17
MAFG::NFE2L1	16
FLI1	16
BHLHE41	15
STAT1	15
FOXP1	14
SMAD2::SMAD3::SMAD4	14
Hand1::Tcf3	14
TP63	14
Nr1h3::Rxra	14
NFIL3	13
EOMES	12
SREBF2	12
ARNT::HIF1A	12
ATF4	12
Ddit3::Cebpa	10
TBX1	10
IRF1	10
MEF2B	10
EGR4	10
NEUROD1	10
ELF5	10
ZNF143	9
Nkx3-1	9
RARA::RXRA	9
GATA1::TAL1	9
Gfi1b	9
TFAP2A-var.3	9
CREB3L1	8
BARX1	8
BCL6B	8
HNF1B	8
NR3C2	8
Vdr	7
KLF13	7
SRF	7
Sox17	7
TP53	6
PRDM1	6
MEIS1	6
NFATC1	6
CREB3	6
Ahr::Arnt	6
HINFP	6
ZBTB33	6
Bcl6	6
MIXL1	5
FOXH1	5
RXRB	5
FOXP3	5
RFX5	5
ETV4	5
NR2C2	4
MEF2A	4
POU2F2	4
HSF2	4
CLOCK	4
HNF1A	4
LEF1	4
EGR3	4
RXRG	4
SPIB	4
Pitx1	3
PROX1	3
ISX	3
Mecom	3
Rfx1	3
SCRT1	3
NR3C1	3
Hic1;	3
REST	3
SNAI2	3
RORA	2
HOXA13	2
Klf12	2
Id2	2
MEF2D	2
Srebf1(var.2)	2
TP73	2
Creb3l2	2
ZBTB18	2
Hes1	2
HOXB13	1
Arx	1
RORA(var.2)	1
GRHL1	1
TBX19	1
NFAT5	1
RFX2	1
DBP	1
FOSB::JUN	1
Ascl2	1
FOXO4	1
Pax6	1
PPARG	1
Nr5a2	1
FOS::JUN(var.2)	1
RXRA::VDR	1
SOX4	1
HOXA5	1
ISL2	1
Hoxa11	1
Nkx2-5-var.2	1