experiment name
hs_HepatocellularCarcin_HepG2_Cancer_HDAC1_SRX100575
number of peaks
54300
antibody
HDAC1
cell line
HEPG2
Number of reads
37017635
sra ftp link
link
SRX search
link
homer denovo motifs
link
Genome view
link
Overlapping motifs:
Motif name
Number of overlap
SP1
5740
MYCN
5492
MYC
5369
NR2F1
5155
FOXA1
4462
CTCF
4347
ELF1
4262
Hnf4a
4134
ZBTB7A
4122
Tcf12
4107
Gabpa
3998
ERG
3918
Foxa2
3853
MAX
3847
E2F1
3739
TAL1::TCF3
3456
ZNF740
3443
E2F4
3169
NR1H2::RXRA
3107
TCF4
3090
ELK1
3028
TCF3
2845
ZEB1
2757
FOS
2588
MAX::MYC
2578
Rxra
2578
Esrrg
2566
EGR1
2501
ETS1
2485
NFIC
2411
FOSL2
2253
HNF4G
2196
Pparg::Rxra
2129
BATF::JUN
2085
CEBPA
2060
USF2
2021
JUND
2009
TFAP2C
1965
EGR2
1916
TFAP2A
1883
Sox2
1854
TFAP2A-var.2
1847
JUN
1843
HEY1
1840
ETV1
1791
MYBL1
1787
Atf3
1777
STAT3
1774
FOSL1
1771
CEBPB
1766
BHLHE40
1721
CEBPD
1708
KLF5
1703
Esrra
1694
USF1
1656
FOS::JUN
1656
YY1
1527
BHLHE41
1494
TEAD4
1474
PBX1
1406
ELK4
1361
RUNX1
1358
MYBL2
1328
KLF4
1292
Ar
1232
Tcf21
1232
TFAP4
1231
NRF1
1212
E2F6
1200
ELF3
1101
ERF
1096
ELK3
1090
TFDP1
1045
TEAD1
1009
NFKB1
986
Gata1
950
ETV3
939
RUNX3
937
FLI1
930
ETV6
924
Gata4
919
GATA3
911
CREB1
886
ZNF263
843
NEUROD1
840
KLF9
832
NFE2
831
GATA5
813
NFIA
798
SP3
793
TCF7L2
792
TFAP2A-var.3
790
GATA2
787
Nfe2l2
767
MAFF
763
SOX9
746
Klf1
738
Tcf7
726
E2F3
716
REL
682
STAT1::STAT2
671
EBF1
663
SPI1
661
MAF::NFE2
648
RELA
648
Foxj2
640
NFIL3
636
PAX5
619
JUNB
618
Atf1
618
Foxo1
591
Arnt
583
Nr1h3::Rxra
573
OTX2
570
THAP1
548
MAFK
541
Bach1::Mafk
536
SP4
523
NFKB2
502
SMAD2::SMAD3::SMAD4
499
MAFG
499
REST
488
TP63
448
SP2
437
ARNT::HIF1A
433
RARA::RXRA
431
Mafb
429
FOXP1
406
BATF3
363
XBP1
358
Hand1::Tcf3
358
Ddit3::Cebpa
352
NFATC3
350
NKX3-2
344
FEV
322
RUNX2
316
NR3C2
316
EGR4
312
POU5F1B
297
GATA1::TAL1
283
STAT1
283
Arid3a
265
HNF1B
262
ATF4
249
Stat5a::Stat5b
244
Ahr::Arnt
243
SNAI2
242
MYB
241
HSF1
234
Arntl
233
Nkx3-1
230
NFYB
223
CDX2
221
NFYA
214
IRF1
208
NR2C2
204
Pou5f1::Sox2
202
PDX1
201
ZNF143
201
RXRB
200
KLF13
199
TEAD2
196
RFX5
194
RXRG
185
ZBTB33
183
HINFP
183
GMEB2
177
PRDM1
170
NR4A2
169
EOMES
169
EGR3
167
FOXP3
162
MAFG::NFE2L1
161
BCL6B
145
Bcl6
139
Vdr
139
ETV4
126
Gmeb1
117
MEF2B
115
HNF1A
113
TP53
106
FOXH1
101
NFATC1
100
Hic1;
100
Gfi1b
100
SCRT1
92
TBX1
91
Sox17
87
CLOCK
86
SPIB
85
SRF
84
ZBTB18
83
MEF2A
79
SREBF1
78
TP73
77
Dux
74
SREBF2
72
NR3C1
71
Rarg
67
CREB3L1
67
ELF5
65
POU2F2
54
Mecom
51
Rarb
48
RXRA::VDR
47
GRHL1
46
RFX2
45
GLI2
44
Ascl2
43
DUX4
37
PPARG
34
MEIS1
32
CREB3
32
Hes1
30
Nr5a2
29
LEF1
29
Rfx1
28
Pax6
26
Creb3l2
25
MEF2D
24
TBX19
23
PROX1
21
BARX1
17
FOS::JUND
15
SMAD3
15
IRF2
13
RARA
13
Id2
13
FOS::JUNB
12
Srebf1(var.2)
11
RORA(var.2)
11
HSF2
10
RORA
9
DBP
7
Klf12
7
FOXO4
6
NFAT5
6
E2F8
6
MIXL1
6
Stat4
6
NFIC::TLX1
5
FOS::JUN(var.2)
5
TFE3
5
TBP
4
PAX3
3
IRF9
3
ATF7
3
FOSB::JUN
3
Arx
3
HOXA5
3
Sox1
3
HES5
3
POU3F2
3
Hoxa11
2
Alx4
2
Pitx1
2
HOXA13
2
Nkx2-5-var.2
2
ESR1
2
MTF1
2
TFEB
1
ISX
1
Hoxa9
1
E2F2
1
NKX2-3
1