NAIK Genome Database

experiment name	hs_HepatocellularCarcin_HepG2_Cancer_ARID1A_SRX1048531	number of peaks	957
antibody	ARID1A
cell line	HEPG2	Number of reads	13038993
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Overlapping motifs:

Motif name	Number of overlap
ZBTB7A	66
SP1	65
E2F1	59
ZNF740	57
ELK1	48
E2F4	47
NRF1	46
ELF1	40
Gabpa	38
MYCN	37
ERG	37
MYC	35
MYBL1	34
ETV1	32
TAL1::TCF3	31
ZEB1	30
TFAP2A-var.2	30
EGR2	29
NR2F1	29
ETS1	29
Esrrg	28
KLF5	27
ELK4	27
EGR1	26
TCF4	26
YY1	25
Tcf12	25
TCF3	24
Sox2	22
TFAP2A	21
SP3	21
NFIC	20
ERF	19
BHLHE40	18
HEY1	18
MAX	18
ELK3	18
NFKB1	18
TFAP2C	18
RUNX1	17
Arid3a	17
REL	16
TFDP1	15
NFATC3	14
RELA	14
KLF4	14
FEV	13
TFAP2A-var.3	13
CTCF	13
KLF9	12
MAX::MYC	11
Klf1	11
NFKB2	11
SPI1	11
E2F3	11
STAT3	11
FOXA1	11
ETV6	10
ETV3	10
BHLHE41	10
E2F6	10
Gata1	10
Esrra	10
USF2	9
STAT1::STAT2	9
SMAD2::SMAD3::SMAD4	9
EBF1	9
SP2	9
Rxra	9
TEAD1	9
Tcf21	8
SOX9	8
PAX5	8
ZNF263	8
ELF3	8
Pparg::Rxra	8
Ar	8
GATA5	7
OTX2	7
Gata4	7
NFIA	7
FOSL2	6
TEAD4	6
FLI1	6
GATA2	6
NR1H2::RXRA	6
HSF1	6
FOS	6
Arnt	6
JUN	6
Foxa2	6
GATA3	6
TFAP4	6
NR4A2	6
Ahr::Arnt	6
NFYB	6
THAP1	6
RUNX3	6
USF1	6
EGR4	5
NKX3-2	5
PBX1	5
Atf1	5
Foxj2	5
SP4	5
Hnf4a	5
CEBPD	4
CEBPA	4
RARA::RXRA	4
JUND	4
NFYA	4
HINFP	4
Mafb	4
NEUROD1	4
FOSL1	4
GMEB2	4
XBP1	4
BATF::JUN	3
Tcf7	3
IRF1	3
Hand1::Tcf3	3
GATA1::TAL1	3
Foxo1	3
Arntl	3
Bach1::Mafk	3
Vdr	3
Bcl6	3
ZNF143	3
ZBTB33	3
MYB	3
ARNT::HIF1A	3
CEBPB	3
POU5F1B	3
RUNX2	3
Atf3	3
Rarg	3
BCL6B	3
CREB1	2
NFIL3	2
STAT1	2
TEAD2	2
TP63	2
TCF7L2	2
ETV4	2
Hic1;	2
PRDM1	2
Gmeb1	2
SCRT1	2
FOXP1	2
Pou5f1::Sox2	2
CDX2	2
NFE2	2
MAFF	2
ELF5	2
NFATC1	2
Nkx3-1	2
JUNB	2
FOS::JUN	2
SREBF1	2
Stat5a::Stat5b	2
NR2C2	1
TP53	1
MAF::NFE2	1
TBX1	1
SREBF2	1
MEF2B	1
BARX1	1
GLI2	1
LEF1	1
FOXP3	1
TP73	1
EOMES	1
KLF13	1
Nfe2l2	1
PDX1	1
Pitx1	1
NR3C1	1
BATF3	1
Sox17	1
Gfi1b	1
TFE3	1
MAFG	1
EGR3	1
MAFK	1
MEF2A	1
Ascl2	1
Nr1h3::Rxra	1
NR3C2	1