NAIK Genome Database

experiment name	hs_HepatocellularCarcin_HepG2_Cancer_ARID1A_SRX1048530	number of peaks	8210
antibody	ARID1A
cell line	HEPG2	Number of reads	15070701
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
SP1	992
E2F1	912
NRF1	774
ZNF740	759
E2F4	580
EGR1	513
MYCN	410
ZBTB7A	364
ELK1	345
MYC	342
TFAP2A-var.2	327
ERG	323
KLF5	317
EGR2	311
NR2F1	283
MAX	262
Gabpa	262
ELF1	249
TFAP2A	242
BHLHE40	240
TAL1::TCF3	231
ETS1	225
SP3	211
SP2	208
TFDP1	207
MYBL1	205
TCF4	204
Esrrg	198
Tcf12	196
ZEB1	194
ETV1	186
E2F6	173
TFAP2C	167
STAT3	164
ELK4	163
TCF3	160
KLF4	159
Klf1	159
YY1	155
HEY1	154
MAX::MYC	151
USF2	149
NFYB	148
NFYA	146
TFAP2A-var.3	140
ELK3	139
SOX9	138
NFIC	137
SP4	130
Atf1	126
ERF	125
Hnf4a	122
USF1	122
CREB1	118
Pparg::Rxra	118
NR1H2::RXRA	116
Rxra	115
NFKB1	113
CTCF	112
Sox2	112
FOXA1	108
Esrra	108
E2F3	104
REL	95
RUNX1	89
ZNF263	89
KLF9	84
Arid3a	84
RELA	82
ETV6	82
CEBPD	81
Foxa2	81
CEBPA	77
BHLHE41	74
THAP1	74
EBF1	74
ETV3	74
FLI1	74
CEBPB	72
NFIA	70
TEAD4	70
FOS	69
NFKB2	67
XBP1	64
RUNX3	64
BATF::JUN	62
NFATC3	60
OTX2	58
PAX5	58
Arnt	57
BATF3	57
Tcf21	56
JUN	56
HNF4G	55
JUND	55
FOSL2	54
EGR4	54
Ar	54
SMAD2::SMAD3::SMAD4	53
POU5F1B	53
SNAI2	52
TEAD1	50
STAT1::STAT2	49
Gata1	48
Atf3	48
FOSL1	47
NFIL3	46
ELF3	46
FEV	46
FOS::JUN	44
TCF7L2	43
GMEB2	43
ARNT::HIF1A	42
TFAP4	41
GATA3	41
Arntl	41
PBX1	40
RARA::RXRA	39
EGR3	38
Tcf7	37
Ahr::Arnt	36
MYB	36
SPI1	35
HSF1	35
Hand1::Tcf3	34
NEUROD1	34
Foxj2	33
RUNX2	33
TP63	31
Gata4	31
GATA5	29
NKX3-2	28
GATA2	28
ZBTB33	27
HINFP	27
MYBL2	26
Gmeb1	25
Foxo1	24
NR4A2	24
Nr1h3::Rxra	24
Stat5a::Stat5b	24
NFE2	22
STAT1	21
CREB3L1	20
KLF13	20
CDX2	20
SPIB	20
TEAD2	19
CLOCK	18
JUNB	17
RXRB	16
Mafb	16
BCL6B	16
RXRG	16
MAF::NFE2	16
Nfe2l2	16
NR3C2	15
MEF2B	15
NR2C2	14
Vdr	14
SREBF1	14
MAFF	13
Bach1::Mafk	13
PDX1	13
Bcl6	13
FOXP1	12
ATF4	12
FOXP3	12
SREBF2	12
ETV4	12
PRDM1	10
EOMES	10
Sox17	10
GATA1::TAL1	10
NFATC1	10
Rarb	9
MAFK	9
Hic1;	9
LEF1	8
POU2F2	8
Ddit3::Cebpa	8
MEF2A	8
Pou5f1::Sox2	8
ZNF143	8
Ascl2	8
TBX1	8
Dux	7
Nkx3-1	7
CREB3	7
SRF	7
MAFG	7
Rarg	7
SCRT1	6
Mecom	6
IRF1	6
GLI2	6
RFX5	5
GRHL1	5
FOXH1	5
REST	5
ELF5	5
ZBTB18	5
TP53	5
NFAT5	4
NR3C1	4
PROX1	4
HNF1B	4
Gfi1b	4
Creb3l2	4
MEF2D	3
Id2	3
HOXA13	3
HSF2	3
Hes1	3
RFX2	3
HNF1A	3
TP73	2
DUX4	2
SMAD3	2
Pitx1	2
Pax6	2
RORA	2
FOS::JUND	2
RORA(var.2)	2
BARX1	2
MAFG::NFE2L1	2
TBX19	2
FOS::JUNB	1
Arx	1
HES5	1
Nr5a2	1
ISX	1
HOXA5	1
Hoxa11	1
TBP	1
E2F8	1
MEIS1	1
Srebf1(var.2)	1
RXRA::VDR	1
DBP	1
SREBF2(var.2)	1
Alx4	1
Rfx1	1
PPARG	1
RARA	1
ISL2	1
E2F2	1
MTF1	1

Motif name

Number of overlap

992

912

774

759

580