NAIK Genome Database

experiment name	hs_H1EScellsweregrownin_H1EScellsweregrownin_undef_HDAC2_SRX116457	number of peaks	40443
antibody	HDAC2
cell line	H1ESCELLSWEREGROWNIN	Number of reads	30787673
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
MYCN	1681
MYC	1545
SP1	1504
E2F1	1198
CTCF	1150
TCF4	1143
Tcf12	1127
TAL1::TCF3	1121
MAX	1080
TCF3	900
ZBTB7A	889
EGR1	848
ZNF740	847
E2F4	835
Sox2	801
NR2F1	799
TFAP2A-var.2	791
ERG	739
ZEB1	724
TFAP2A	706
ELF1	700
Gabpa	695
MAX::MYC	689
TFAP2C	640
EGR2	628
Esrrg	604
NRF1	600
E2F6	553
ELK1	536
BHLHE41	511
MYBL1	449
NFIC	447
BHLHE40	441
ETS1	428
USF2	426
KLF4	415
ZNF263	400
YY1	399
TFDP1	387
STAT3	377
KLF5	361
ETV1	349
HEY1	342
TFAP2A-var.3	340
RUNX1	339
NFKB1	334
TEAD4	324
USF1	321
TFAP4	315
Tcf21	307
Pou5f1::Sox2	285
EBF1	263
KLF9	260
POU5F1B	255
OTX2	252
FOXA1	247
NEUROD1	244
Klf1	240
REL	239
FOS	237
FLI1	237
TEAD1	237
Esrra	235
NR1H2::RXRA	234
REST	234
SP3	233
Ar	232
ELK4	228
RUNX3	216
Arnt	211
Rxra	209
ETV3	207
ELK3	204
SMAD2::SMAD3::SMAD4	191
RELA	191
ETV6	191
Pparg::Rxra	184
BATF::JUN	180
SNAI2	176
SPI1	175
JUND	174
Gata1	171
E2F3	170
PAX5	169
NFKB2	166
FOSL2	166
ERF	163
Hnf4a	163
Foxa2	162
PBX1	161
ELF3	160
SOX9	154
Atf3	149
STAT1::STAT2	145
FOSL1	145
JUN	144
ARNT::HIF1A	143
THAP1	139
SP4	133
CREB1	130
FOS::JUN	126
Hand1::Tcf3	125
Gata4	124
GATA2	121
Atf1	115
GATA5	113
NFATC3	112
GATA3	109
FEV	105
EGR4	105
CEBPB	101
Ahr::Arnt	101
NFIA	100
SP2	85
HINFP	83
TCF7L2	82
EOMES	82
RUNX2	80
Foxj2	79
Nr1h3::Rxra	78
Bach1::Mafk	78
NFE2	77
MAFK	77
NFYB	75
XBP1	75
CEBPD	73
HNF4G	73
TP63	72
Tcf7	72
MYB	70
RARA::RXRA	68
Nfe2l2	67
Foxo1	67
Arntl	66
CEBPA	66
NR4A2	64
KLF13	63
EGR3	63
MAF::NFE2	62
MAFF	61
NR3C2	60
NFYA	59
STAT1	58
Stat5a::Stat5b	58
HSF1	55
GMEB2	55
FOXH1	54
MAFG	53
FOXP1	51
GATA1::TAL1	50
TEAD2	49
Hic1;	49
Mafb	47
Gmeb1	46
BATF3	44
BCL6B	44
Bcl6	43
ZNF143	43
JUNB	39
Sox17	38
NKX3-2	38
SPIB	35
PRDM1	32
PDX1	32
ETV4	31
RFX5	30
SCRT1	29
MYBL2	29
ZBTB33	27
POU2F2	27
SREBF1	26
CREB3L1	25
Gfi1b	24
TBX1	24
FOXP3	24
Rarg	24
ATF4	24
IRF1	23
CDX2	22
CLOCK	21
MEF2B	21
TP73	20
RXRB	20
RXRG	20
NFATC1	18
Arid3a	18
TP53	18
ELF5	18
LEF1	17
Vdr	17
NFIL3	16
Ddit3::Cebpa	16
GLI2	16
NR2C2	16
ZBTB18	15
SRF	13
SREBF2	13
Rarb	13
MEF2A	12
GRHL1	12
NR3C1	11
Dux	11
Ascl2	10
PROX1	9
MAFG::NFE2L1	9
Pax6	9
RXRA::VDR	7
Mecom	7
RFX2	7
MEIS1	6
Rfx1	6
Hes1	6
HNF1B	5
MEF2D	5
DUX4	5
Creb3l2	5
TBX19	5
Nr5a2	5
CREB3	5
SMAD3	5
BARX1	4
PPARG	4
Nkx3-1	4
Srebf1(var.2)	3
MIXL1	3
Klf12	3
HES5	2
RARA	2
HSF2	2
RORA	2
TBP	2
ISX	1
HOXA5	1
Hoxa11	1
IRF2	1
HNF1A	1
FOS::JUND	1
NFIC::TLX1	1
HOXA13	1
POU3F2	1
Id2	1
RORA(var.2)	1
HOXB13	1
TFE3	1
Nkx2-5-var.2	1
Tcfl5	1
Alx4	1
Arx	1
Stat4	1
Stat6	1
NKX2-3	1

Motif name

Number of overlap

1681

1545

1504

1198

1150