NAIK Genome Database

experiment name	hs_foreskinfibroblastce_BJEL_undef_RNAPOLII_SRX1184131	number of peaks	21938
antibody	RNAPOLII
cell line	BJEL	Number of reads	53073964
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
E2F1	1157
YY1	773
HEY1	761
MYCN	742
TAL1::TCF3	707
MYC	689
ZBTB7A	683
E2F4	669
SP1	630
TFAP2A-var.2	619
NR2F1	578
Tcf12	564
ERG	560
ZEB1	550
ZNF740	541
TCF3	540
TCF4	538
MYBL1	524
TFAP2A	501
EGR1	498
Esrrg	474
Gabpa	435
ELF1	415
ELK1	389
TFAP2C	388
EGR2	372
MAX	360
Sox2	358
STAT3	348
NFIC	334
E2F6	329
TFDP1	329
ETS1	326
NRF1	302
RUNX1	291
TFAP2A-var.3	256
MAX::MYC	234
ETV1	232
CTCF	229
NFKB1	222
ZNF263	221
BHLHE40	215
BHLHE41	210
FOXA1	207
Ar	187
EBF1	183
ELK4	181
RUNX3	181
Gata1	179
Rxra	178
Esrra	176
Pparg::Rxra	170
REL	168
FLI1	165
Tcf21	165
KLF4	161
NEUROD1	158
GATA3	157
STAT1::STAT2	155
RELA	149
ELK3	148
ETV6	139
TEAD4	138
SPI1	138
USF2	137
FEV	135
Hand1::Tcf3	131
TFAP4	131
Foxa2	130
NR1H2::RXRA	128
GATA2	126
E2F3	125
NFATC3	124
ELF3	123
SMAD2::SMAD3::SMAD4	122
Hnf4a	122
THAP1	122
OTX2	120
FOS	120
ERF	120
ETV3	117
NFKB2	117
KLF5	116
CEBPB	113
USF1	111
SOX9	109
PAX5	108
KLF9	108
SP3	108
PBX1	108
Klf1	108
Gata4	106
Arnt	96
TEAD1	94
GATA5	93
SNAI2	88
BATF::JUN	84
NFIA	82
FOSL2	77
JUND	72
NR4A2	70
FOSL1	68
HSF1	67
TCF7L2	65
CEBPA	64
Stat5a::Stat5b	63
HINFP	61
STAT1	60
JUN	60
RUNX2	60
CEBPD	60
ARNT::HIF1A	58
NR3C2	56
Gmeb1	56
EGR4	56
Tcf7	55
HNF4G	55
Ahr::Arnt	55
Atf3	54
TP63	53
Foxo1	52
MYB	52
POU5F1B	51
Foxj2	51
Mafb	51
Atf1	51
GATA1::TAL1	51
CREB1	50
SPIB	48
FOS::JUN	47
MAFK	41
IRF1	40
Pou5f1::Sox2	40
NKX3-2	37
Nr1h3::Rxra	36
PRDM1	35
RARA::RXRA	34
MAF::NFE2	32
SP2	32
SP4	32
NFE2	31
GMEB2	31
EGR3	31
XBP1	30
BCL6B	29
Arid3a	29
EOMES	28
Bach1::Mafk	28
Nfe2l2	27
Hic1;	27
PDX1	27
Gfi1b	26
Bcl6	25
CDX2	25
NFATC1	25
ZNF143	25
MEF2A	24
CREB3L1	24
MAFG	23
Arntl	23
KLF13	23
MEF2B	22
FOXP1	22
Rarg	21
ETV4	21
MAFF	20
TEAD2	20
FOXH1	19
Dux	19
Ascl2	18
BATF3	18
ATF4	18
Vdr	17
SRF	17
NFYB	17
REST	16
SREBF1	16
SCRT1	16
FOXP3	16
GLI2	15
JUNB	15
NR2C2	15
ZBTB33	15
RXRB	14
DUX4	13
NR3C1	13
TP73	13
MYBL2	13
NFIL3	11
TBX1	11
RXRG	11
SREBF2	11
TP53	11
Sox17	10
CLOCK	8
Rarb	8
ZBTB18	8
PPARG	8
Mecom	7
NFYA	7
HNF1B	6
GRHL1	6
LEF1	6
Nkx3-1	6
HSF2	5
PROX1	5
Ddit3::Cebpa	5
HOXA5	5
RFX5	5
ELF5	4
CREB3	4
MEF2D	4
SMAD3	4
Pitx1	4
Hes1	4
Nr5a2	4
POU2F2	4
Creb3l2	3
RXRA::VDR	3
MAFG::NFE2L1	3
TBX19	3
Id2	3
BARX1	3
MEIS1	2
RORA(var.2)	2
E2F8	2
Pax6	2
Stat4	2
IRF2	2
Rfx1	2
IRF9	1
HNF1A	1
SREBF2(var.2)	1
RARA	1
HOXA13	1
ISX	1
MIXL1	1
Srebf1(var.2)	1
HOXB13	1
RORA	1
NKX2-3	1
Alx4	1

Motif name

Number of overlap

1157

773

761

742

707