NAIK Genome Database

experiment name	hs_fibroblast_NHDF_normal_CTCF_SRX199904	number of peaks	41319
antibody	CTCF	link to motif view if antibody and consensus motif is the same
cell line	NHDF	Number of reads	20823173
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	14828
MYC	3187
MYCN	2871
Tcf12	2374
SP1	1968
TCF4	1866
NFIC	1722
TAL1::TCF3	1565
ZEB1	1526
TCF3	1271
NR2F1	1259
MYBL1	1129
RUNX3	1052
ZBTB7A	1026
RUNX1	1021
Sox2	1017
STAT3	1010
E2F4	929
MAX	837
Gabpa	805
ERG	763
ZNF740	758
FOXA1	706
ELF1	687
Esrrg	680
YY1	670
TFAP2A-var.2	659
E2F1	644
TFAP2C	639
TEAD4	602
TFAP2A	601
MAX::MYC	595
EGR1	587
Arid3a	565
ELK1	549
TFAP4	536
NR1H2::RXRA	519
Foxa2	508
Rxra	469
NEUROD1	463
EGR2	462
Pparg::Rxra	460
Gata1	443
GATA3	439
Nr1h3::Rxra	374
NFKB1	374
Ar	374
FOS	371
CEBPB	370
ZNF263	370
TEAD1	367
BHLHE41	359
KLF4	355
OTX2	344
USF2	340
TFAP2A-var.3	337
EBF1	329
Tcf21	327
PBX1	323
ETS1	313
NRF1	308
USF1	305
THAP1	301
E2F6	298
Hnf4a	291
FOSL2	282
STAT1::STAT2	279
BATF::JUN	264
BHLHE40	261
SOX9	257
Gata4	255
GATA2	253
NFIA	248
PAX5	248
Esrra	243
E2F3	237
NKX3-2	234
REL	233
Atf3	230
Foxj2	228
ELF3	222
SPI1	220
ETV1	218
JUND	217
FOSL1	217
RELA	212
CEBPD	211
KLF5	207
POU5F1B	206
SMAD2::SMAD3::SMAD4	204
CEBPA	188
JUN	181
TCF7L2	178
GATA5	169
NFKB2	166
Foxo1	164
PDX1	164
FOS::JUN	162
ELK4	161
MAFK	158
FLI1	157
Pou5f1::Sox2	156
Tcf7	156
SP4	153
Arnt	145
CREB1	145
Hand1::Tcf3	143
KLF9	141
RUNX2	140
STAT1	137
Mafb	137
SP3	134
ETV6	128
HSF1	126
ETV3	126
Klf1	123
ARNT::HIF1A	123
CDX2	122
TEAD2	121
EOMES	120
Atf1	116
RARA::RXRA	112
HNF4G	112
TFDP1	106
BCL6B	106
MYBL2	106
FOXP1	103
HEY1	103
Vdr	101
ELK3	99
TP63	98
MAFF	92
MYB	90
KLF13	87
MEF2B	86
Stat5a::Stat5b	83
Bcl6	83
MEF2A	82
ERF	80
Gfi1b	80
NFE2	78
TP53	77
GATA1::TAL1	75
Nfe2l2	75
Bach1::Mafk	74
MAF::NFE2	73
Nkx3-1	70
NFATC3	66
IRF1	64
BATF3	63
PRDM1	62
SRF	62
NR3C2	60
ZBTB18	60
EGR4	59
SP2	58
MAFG	55
SCRT1	54
ZNF143	53
JUNB	53
FEV	50
POU2F2	50
TBX1	48
NFIL3	48
FOXP3	47
ATF4	47
Ahr::Arnt	46
NR4A2	44
HINFP	43
NFYB	42
NFYA	40
PPARG	39
SNAI2	38
REST	34
SPIB	33
FOXH1	33
RFX5	33
Hic1;	32
ELF5	31
EGR3	30
XBP1	29
Arntl	29
Ddit3::Cebpa	28
NFATC1	24
Dux	23
SREBF2	22
RXRG	22
RXRB	21
Ascl2	20
GRHL1	20
Gmeb1	18
RXRA::VDR	18
HNF1B	17
DUX4	17
NR3C1	17
SREBF1	17
TP73	15
NR2C2	14
GLI2	14
Srebf1(var.2)	13
Rarg	12
MEF2D	11
Rarb	10
MAFG::NFE2L1	10
Mecom	10
RORA(var.2)	10
ETV4	9
MEIS1	9
Sox17	9
ZBTB33	9
GMEB2	8
CREB3L1	8
RARA	8
PROX1	7
Nr5a2	6
CLOCK	6
LEF1	5
CREB3	5
Hes1	5
Creb3l2	4
TBX19	4
RORA	3
Pax6	3
MIXL1	2
RFX2	2
TFE3	2
Pitx1	2
HNF1A	2
SMAD3	2
HOXA13	2
Alx4	2
FOS::JUND	1
NKX2-8	1
Hoxa9	1
BARX1	1
Arx	1
E2F8	1
IRF9	1
Rfx1	1
HES5	1
NFIC::TLX1	1

Motif name

Number of overlap

14828

3187

2871

2374

1968