NAIK Genome Database

experiment name	hs_EmbryonicStemCells_H1hESC_Normal_CHD1_SRX186640	number of peaks	35131
antibody	CHD1
cell line	H1HESC	Number of reads	52285283
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
MYC	795
MYCN	760
CTCF	697
Sox2	678
SP1	659
MAX	634
TCF4	585
TAL1::TCF3	580
NR2F1	536
Tcf12	524
ERG	507
ZBTB7A	476
TFAP2A	469
TCF3	459
Esrrg	449
E2F1	444
TFAP2A-var.2	435
Gabpa	421
FOXA1	418
RUNX1	388
ELF1	379
TFAP2C	370
ZEB1	362
E2F6	341
STAT3	336
MAX::MYC	328
EGR1	325
ZNF263	322
YY1	318
OTX2	315
ZNF740	313
E2F4	297
Ar	296
Gata1	290
NFIC	287
NFKB1	285
MYBL1	284
Foxa2	281
FOS	278
TEAD4	278
SPI1	255
CEBPB	230
GATA2	226
GATA3	225
BHLHE41	224
Hnf4a	214
KLF4	213
POU5F1B	213
RUNX3	207
ETS1	205
REL	202
TEAD1	200
Gata4	198
EBF1	198
Esrra	195
Rxra	192
JUND	190
ELK1	187
EGR2	187
Pparg::Rxra	185
Pou5f1::Sox2	183
FLI1	182
USF1	181
BATF::JUN	179
TFAP2A-var.3	179
FOSL2	177
RELA	176
USF2	171
NRF1	167
GATA5	166
STAT1::STAT2	164
PBX1	161
HEY1	146
NFKB2	137
TFAP4	137
BHLHE40	135
NEUROD1	135
FOSL1	133
NR1H2::RXRA	132
CEBPA	131
ELF3	125
JUN	123
FOS::JUN	119
TFDP1	118
Tcf21	116
Atf3	107
Arnt	106
SOX9	103
ETV1	98
TCF7L2	96
Hand1::Tcf3	94
TP63	91
FEV	90
ETV3	89
ETV6	88
PAX5	86
GATA1::TAL1	85
SMAD2::SMAD3::SMAD4	85
MAFK	85
KLF5	84
CEBPD	83
ARNT::HIF1A	82
Tcf7	80
ELK4	79
KLF9	78
CREB1	77
THAP1	73
NFE2	70
MAF::NFE2	70
HNF4G	69
NFIA	66
SNAI2	66
REST	65
NR3C2	64
Mafb	63
Bach1::Mafk	63
Nfe2l2	63
HSF1	61
Atf1	61
PRDM1	60
NFATC3	59
EOMES	59
MAFF	58
Klf1	57
SPIB	57
NR4A2	56
Foxj2	56
RUNX2	54
MYB	54
Stat5a::Stat5b	53
SP3	53
ERF	51
Foxo1	50
ELK3	50
CDX2	47
PDX1	45
BCL6B	43
STAT1	42
Bcl6	41
MAFG	41
NKX3-2	41
MEF2B	40
FOXP1	39
TEAD2	39
SCRT1	39
Ahr::Arnt	38
RARA::RXRA	36
ZNF143	36
Nr1h3::Rxra	36
Dux	35
MEF2A	35
JUNB	34
Gmeb1	33
Arid3a	32
ATF4	31
SRF	31
POU2F2	29
E2F3	29
Gfi1b	28
DUX4	28
FOXH1	27
Ddit3::Cebpa	24
EGR4	24
NFYB	22
Hic1;	22
NFIL3	22
BATF3	21
IRF1	20
Vdr	20
TBX1	20
TP73	20
RXRB	19
SP4	18
TP53	18
MYBL2	18
NR2C2	17
Sox17	16
CREB3L1	16
NFATC1	16
RXRG	15
MAFG::NFE2L1	14
Mecom	13
GRHL1	13
HINFP	13
NR3C1	12
KLF13	11
XBP1	11
HNF1B	10
SP2	10
FOXP3	9
EGR3	9
LEF1	9
Rarg	9
Nkx3-1	9
RORA(var.2)	9
NFYA	9
Rarb	8
ZBTB33	8
TBX19	7
GMEB2	7
RFX5	7
Srebf1(var.2)	7
ETV4	7
ELF5	6
SREBF2	6
Arntl	6
RXRA::VDR	6
PPARG	6
MEF2D	5
BARX1	5
MEIS1	5
CREB3	5
Pax6	5
ZBTB18	5
GLI2	4
Ascl2	4
SMAD3	4
HNF1A	4
Tcfl5	4
Nr5a2	3
MIXL1	3
RORA	2
SREBF1	2
CLOCK	2
PROX1	2
HOXA5	2
HSF2	2
DBP	2
NFIC::TLX1	2
NKX2-3	2
Alx4	2
Creb3l2	1
Hes2	1
FOS::JUN(var.2)	1
PAX3	1
RARA	1
HOXB13	1
Pitx1	1
Klf12	1
IRF2	1
SOX4	1
E2F8	1
POU3F2	1
RFX2	1
HOXA13	1
Id2	1
ISX	1
Nkx2-5-var.2	1
FOSB::JUN	1
Rfx1	1

Motif name

Number of overlap

795

760

697

678

659