NAIK Genome Database

experiment name	hs_EmbryonicStemCells_BGO3_normal_SMAD3_SRX130089	number of peaks	12117
antibody	SMAD3	link to motif view if antibody and consensus motif is the same
cell line	BGO3	Number of reads	8168460
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Overlapping motifs:

Motif name	Number of overlap
Sox2	715
SP1	473
ZNF740	283
Pou5f1::Sox2	279
Tcf12	275
TCF4	241
EGR1	240
TAL1::TCF3	188
POU5F1B	181
E2F1	179
NR2F1	175
MYC	166
MYCN	164
ERG	157
TCF3	157
TEAD4	155
MAX	154
OTX2	154
TFAP2A-var.2	148
EGR2	140
CTCF	138
Gabpa	136
TEAD1	134
Esrrg	130
SMAD2::SMAD3::SMAD4	129
FOS	127
TFAP2A	125
ZBTB7A	121
E2F4	119
ELF1	117
FOXH1	114
FOXA1	112
JUND	110
ELK1	109
BATF::JUN	109
BHLHE41	106
NFIC	97
FOSL2	96
JUN	96
TFAP2A-var.3	96
FOS::JUN	94
YY1	93
TFAP2C	90
FOSL1	89
Foxa2	87
KLF5	87
MYBL1	84
Atf3	83
ETS1	80
ZEB1	79
PBX1	76
NR1H2::RXRA	75
Sox17	73
E2F6	73
MAX::MYC	71
EBF1	71
KLF4	71
Gata4	70
ETV1	69
STAT3	67
NRF1	66
ZNF263	65
Esrra	62
HEY1	61
RUNX1	61
Ar	58
USF1	56
NEUROD1	56
TFAP4	55
ELK4	55
TFDP1	55
USF2	54
FLI1	54
SP3	53
Gata1	53
Bach1::Mafk	52
BHLHE40	52
Pparg::Rxra	51
SP4	51
TCF7L2	51
Tcf21	50
Hnf4a	50
SOX9	49
GATA2	48
Rxra	48
ETV3	48
NFKB1	47
CREB1	47
Tcf7	47
ELK3	46
KLF9	44
GATA3	41
Atf1	41
Klf1	40
MAFK	40
GATA5	39
NFE2	39
RUNX3	37
Nfe2l2	36
TP63	36
ETV6	35
CEBPB	35
JUNB	34
EOMES	34
ERF	32
THAP1	31
Foxj2	31
SP2	29
MAF::NFE2	29
ELF3	28
REL	28
SPI1	28
RELA	28
Hand1::Tcf3	27
NFIA	26
STAT1::STAT2	25
MAFG	25
NFKB2	23
RARA::RXRA	23
Mafb	23
POU2F2	23
FOXP1	23
PAX5	22
MAFF	22
GATA1::TAL1	22
NFYB	22
BATF3	21
RUNX2	21
EGR4	21
FEV	18
CEBPD	18
NFATC3	18
Nr1h3::Rxra	18
PDX1	17
E2F3	17
SNAI2	16
HNF4G	16
CEBPA	15
LEF1	15
NR3C2	15
Ahr::Arnt	15
EGR3	15
HSF1	14
NFYA	14
TEAD2	14
Arnt	14
XBP1	13
Foxo1	13
Arntl	12
ZNF143	12
MYB	12
SMAD3	11
HINFP	11
NR4A2	10
NKX3-2	9
Rarg	9
TP53	9
ATF4	9
ARNT::HIF1A	8
GMEB2	8
Hic1;	8
SCRT1	8
STAT1	8
ETV4	7
CDX2	7
Stat5a::Stat5b	7
BCL6B	7
RXRB	7
MYBL2	7
TP73	7
Gfi1b	7
NFIL3	7
MEF2B	6
PRDM1	6
SREBF2	6
RFX5	6
Arid3a	6
RXRG	6
KLF13	6
SREBF1	6
CREB3L1	6
Gmeb1	6
SRF	6
NR2C2	5
HNF1B	5
NFATC1	5
ELF5	4
MAFG::NFE2L1	4
Ddit3::Cebpa	4
Bcl6	4
GRHL1	4
ZBTB33	4
TBX1	4
FOXP3	4
Ascl2	3
RFX2	3
Vdr	3
MEF2A	3
REST	2
TBX19	2
DUX4	2
Pax6	2
CLOCK	2
IRF1	2
Dux	2
Nr5a2	2
MEIS1	1
GLI2	1
FOS::JUND	1
RORA	1
Rfx1	1
NR3C1	1
Id2	1
RORA(var.2)	1
BARX1	1
Mecom	1
SPIB	1
MIXL1	1
HSF2	1
FOS::JUNB	1
ZBTB18	1
Hes1	1
MEF2D	1
DBP	1
PROX1	1
CREB3	1
Rarb	1