NAIK Genome Database

experiment name	hs_EmbryonicStemCells_BGO3_normal_SMAD3_SRX130088	number of peaks	9202
antibody	SMAD3	link to motif view if antibody and consensus motif is the same
cell line	BGO3	Number of reads	9549051
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Overlapping motifs:

Motif name	Number of overlap
Sox2	319
SP1	266
FOS	216
TCF4	195
Tcf12	193
JUND	176
BATF::JUN	171
ERG	167
SMAD2::SMAD3::SMAD4	164
TAL1::TCF3	163
FOSL1	157
FOSL2	157
JUN	156
ZNF740	153
MYC	153
EGR1	151
Gabpa	148
Esrrg	148
TCF3	147
FOS::JUN	147
Atf3	137
NR2F1	133
OTX2	128
Pou5f1::Sox2	127
MYCN	127
FOXA1	125
Foxa2	125
EOMES	122
MAX	111
Gata4	108
PBX1	107
ZBTB7A	106
ELF1	106
TEAD4	104
POU5F1B	101
TEAD1	94
BHLHE41	90
TFAP2A	86
CTCF	82
FOXH1	80
FLI1	78
Gata1	75
NFIC	75
ETS1	74
E2F1	72
EGR2	71
TFAP2A-var.2	69
GATA5	68
JUNB	66
GATA2	65
TCF7L2	62
Tcf7	62
TFAP2C	60
RUNX1	59
ZEB1	57
E2F4	56
MAX::MYC	56
ELK1	55
Ar	54
Esrra	53
Tcf21	52
NFE2	51
NEUROD1	50
GATA3	50
Sox17	50
EBF1	49
Bach1::Mafk	49
ETV1	49
KLF4	48
Nfe2l2	46
NR1H2::RXRA	45
STAT3	45
ZNF263	43
NFKB1	43
MYBL1	42
Rxra	40
Pparg::Rxra	40
Hnf4a	39
KLF5	38
TFAP4	37
E2F6	37
USF1	35
TFAP2A-var.3	35
MAF::NFE2	34
MAFK	33
ELF3	33
FOXP1	30
MAFG	30
MAFF	30
ETV3	30
ETV6	28
CREB1	28
SPI1	28
YY1	28
REL	28
ERF	28
USF2	27
Hand1::Tcf3	26
SOX9	26
SP3	23
BHLHE40	23
NRF1	23
Klf1	22
NFIA	22
KLF9	21
RELA	21
LEF1	21
SP4	21
RUNX3	21
TP63	20
Mafb	20
HEY1	20
CEBPA	19
ELK4	19
EGR4	18
GATA1::TAL1	18
CEBPB	18
Foxj2	18
NFKB2	17
PAX5	17
ARNT::HIF1A	16
STAT1::STAT2	16
Atf1	16
HNF4G	16
MYBL2	16
Arnt	16
PDX1	16
NR3C2	15
RARA::RXRA	15
THAP1	15
Ahr::Arnt	14
ELK3	14
TFDP1	14
RUNX2	14
CEBPD	13
POU2F2	13
Nr1h3::Rxra	12
PRDM1	11
NKX3-2	11
Foxo1	10
Gfi1b	10
ETV4	10
E2F3	10
BATF3	10
TBX1	10
NFIL3	8
SCRT1	8
SP2	8
TEAD2	8
EGR3	8
SNAI2	7
MEF2B	7
NFATC3	7
ZNF143	6
NFATC1	6
TP73	6
MYB	6
FEV	6
CREB3L1	5
GMEB2	5
Dux	5
FOXP3	5
MAFG::NFE2L1	5
XBP1	5
STAT1	5
Gmeb1	5
CDX2	5
NFYA	4
TBX19	4
TP53	4
Pax6	4
NR3C1	4
ZBTB33	4
HINFP	4
SRF	4
SMAD3	4
NFYB	4
NR4A2	4
HSF1	4
Stat5a::Stat5b	4
MEF2A	3
Nkx3-1	3
ATF4	3
ELF5	3
SPIB	3
Rarg	3
Vdr	3
HNF1B	2
Arntl	2
RXRG	2
REST	2
RFX5	2
DUX4	2
Ddit3::Cebpa	2
MEIS1	2
Rarb	2
BARX1	2
Bcl6	2
Arid3a	2
RXRB	2
Ascl2	2
CREB3	2
BCL6B	2
PROX1	1
Tcfl5	1
FOS::JUND	1
NKX2-3	1
HNF1A	1
IRF1	1
Hes1	1
ZBTB18	1
Hic1;	1
MIXL1	1
ISL2	1
TBP	1
SREBF2	1
FOS::JUNB	1
KLF13	1