NAIK Genome Database

experiment name	hs_EmbryonicStemCell_H9hESC_normal_SMAD2_SRX064480	number of peaks	36745
antibody	SMAD2
cell line	H9HESC	Number of reads	10539771
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
SP1	2159
CTCF	1570
MYCN	1510
MYC	1486
E2F1	1303
ZNF740	1262
Tcf12	1133
TCF4	1107
TAL1::TCF3	1012
MAX	989
E2F4	975
EGR1	952
ERG	936
Gabpa	892
Sox2	856
FOXH1	791
EGR2	781
TCF3	777
SMAD2::SMAD3::SMAD4	769
ZBTB7A	755
ELF1	748
TFAP2A-var.2	742
ZEB1	742
ELK1	712
NR2F1	703
Esrrg	672
NRF1	670
TFAP2C	636
TFAP2A	631
ETS1	625
BHLHE41	574
MAX::MYC	573
KLF5	536
POU5F1B	500
NFIC	492
ETV1	428
KLF4	401
MYBL1	398
BHLHE40	384
E2F6	382
YY1	378
KLF9	376
FOS	367
TEAD4	337
Pou5f1::Sox2	333
RUNX1	332
TFAP2A-var.3	330
ZNF263	329
SP3	328
USF2	327
ELK4	320
Klf1	317
FOSL2	315
TFDP1	313
JUND	311
STAT3	297
USF1	296
ELK3	288
TEAD1	281
ERF	281
BATF::JUN	280
FOSL1	271
Tcf21	266
FOXA1	262
ETV3	262
SP4	258
JUN	251
HEY1	249
E2F3	247
FLI1	244
Atf3	240
CREB1	238
Esrra	235
FOS::JUN	235
NEUROD1	232
NR1H2::RXRA	230
Atf1	227
Ar	226
Arnt	216
PBX1	210
PAX5	210
ETV6	204
NFKB1	203
OTX2	201
THAP1	197
RUNX3	196
SP2	195
Foxa2	188
TFAP4	185
SOX9	185
Rxra	184
EBF1	180
ELF3	170
Pparg::Rxra	168
ARNT::HIF1A	168
Hnf4a	158
SPI1	152
SNAI2	146
REST	144
Hand1::Tcf3	142
REL	133
EGR4	133
XBP1	131
CEBPB	122
NFE2	120
RELA	119
Bach1::Mafk	117
NFYB	115
NFATC3	114
NFYA	111
BATF3	109
NFIA	109
CEBPD	108
Nfe2l2	108
NFKB2	102
MAF::NFE2	98
STAT1::STAT2	96
Gata1	96
RUNX2	94
GMEB2	94
JUNB	93
Ahr::Arnt	91
Nr1h3::Rxra	89
Gata4	87
EOMES	84
CEBPA	84
TP63	83
MAFF	81
HINFP	80
MAFK	78
MAFG	77
Sox17	75
TCF7L2	74
GATA3	72
GATA2	72
Foxj2	71
RARA::RXRA	71
KLF13	69
FEV	65
NR3C2	63
EGR3	61
TEAD2	58
SMAD3	58
MYB	58
Arntl	57
Mafb	56
ZNF143	56
Tcf7	55
NKX3-2	55
GATA5	54
FOXP1	54
Foxo1	52
HNF4G	51
Hic1;	46
ETV4	45
GATA1::TAL1	45
Gmeb1	43
STAT1	40
NFIL3	40
ZBTB33	38
ATF4	36
POU2F2	35
NR4A2	35
Stat5a::Stat5b	34
SCRT1	33
TP53	32
PDX1	31
HSF1	26
RFX5	24
NR2C2	24
Tcfl5	24
BCL6B	24
RXRG	23
RXRB	23
SREBF2	22
LEF1	22
FOXP3	21
CLOCK	20
SPIB	20
Ddit3::Cebpa	20
Ascl2	20
CDX2	19
Vdr	19
SRF	19
Rarg	19
CREB3L1	18
MEF2B	16
MYBL2	16
Bcl6	16
GLI2	16
TP73	16
NFATC1	15
SREBF1	15
Rarb	15
Arid3a	15
ELF5	14
MAFG::NFE2L1	14
Dux	14
NR3C1	14
TBX1	13
PRDM1	12
RXRA::VDR	11
Gfi1b	11
GRHL1	11
ZBTB18	10
MEF2A	9
IRF1	8
CREB3	8
Hes1	7
Pax6	6
Nkx3-1	5
MEIS1	5
Creb3l2	5
RFX2	5
Mecom	5
Rfx1	4
Nr5a2	4
PPARG	4
PROX1	4
TBX19	3
Id2	3
DUX4	2
FOS::JUND	2
HNF1B	2
Stat4	2
Klf12	2
ATF7	2
TFEB	1
RARA	1
TBP	1
Hoxa11	1
NKX2-3	1
Sox1	1
RORA	1
MEF2D	1
MIXL1	1
FOXO4	1
HES5	1
FOS::JUNB	1
Hes2	1

Motif name

Number of overlap

2159

1570

1510

1486

1303