NAIK Genome Database

experiment name	hs_EmbryonicStemCell_H1hESC_normal_RFX5_SRX150462	number of peaks	11689
antibody	RFX5	link to motif view if antibody and consensus motif is the same
cell line	H1HESC	Number of reads	48335741
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	2368
SP1	1180
MYC	999
MYCN	900
Tcf12	819
TCF4	709
ZBTB7A	691
Sox2	654
E2F4	636
NFIC	636
ELK1	633
ERG	629
TAL1::TCF3	623
ZEB1	601
ELF1	584
NR2F1	559
Gabpa	542
E2F1	542
MYBL1	523
TCF3	474
STAT3	456
ZNF740	433
MAX	429
ETS1	418
NFYB	411
Esrrg	394
NFYA	373
CREB1	359
RFX5	353
RUNX1	352
TFAP2A-var.2	320
EGR1	319
SOX9	317
ELK4	317
TFAP2C	311
TFAP2A	310
RUNX3	310
ETV1	303
Atf1	296
YY1	283
TEAD4	282
EGR2	269
FOXA1	261
NRF1	254
NR1H2::RXRA	251
USF2	248
MAX::MYC	247
TFAP4	239
USF1	238
BHLHE41	233
TEAD1	232
KLF5	230
FOS	226
ERF	220
TFDP1	215
KLF4	215
Rxra	207
ETV3	206
BHLHE40	206
ELK3	204
ETV6	203
E2F6	199
OTX2	197
Pou5f1::Sox2	195
Pparg::Rxra	191
BATF3	185
PBX1	180
NEUROD1	176
Foxa2	174
THAP1	173
ZNF263	172
SP2	167
BATF::JUN	165
NFKB1	164
JUND	164
SP3	160
FOSL2	160
SP4	159
Hnf4a	152
POU5F1B	151
E2F3	151
Tcf21	151
TFAP2A-var.3	147
EBF1	146
FLI1	144
Ar	144
FOSL1	142
RELA	141
Gata1	141
CEBPB	140
Esrra	139
JUN	138
Klf1	138
STAT1::STAT2	133
REL	132
Atf3	131
SMAD2::SMAD3::SMAD4	126
HEY1	126
PAX5	123
GATA3	122
FOS::JUN	121
ELF3	120
XBP1	115
CEBPD	114
Nr1h3::Rxra	114
KLF9	113
NFIA	113
Arnt	110
Gata4	109
NKX3-2	107
SPI1	107
NFATC3	103
CEBPA	101
GATA2	100
FEV	97
REST	87
MAFK	85
NFKB2	85
Foxj2	80
TEAD2	79
RUNX2	78
Mafb	77
TP63	76
GATA5	76
PDX1	75
Hand1::Tcf3	74
MYB	72
ARNT::HIF1A	71
Nfe2l2	71
NFE2	69
GMEB2	67
NR4A2	67
HNF4G	66
TCF7L2	64
STAT1	63
Arid3a	63
MAFF	60
EOMES	59
MAF::NFE2	59
Bach1::Mafk	58
Foxo1	58
ZNF143	57
HSF1	54
JUNB	50
SREBF2	50
Tcf7	49
Gmeb1	48
EGR4	48
Stat5a::Stat5b	48
Ahr::Arnt	48
SCRT1	47
RARA::RXRA	47
MAFG	46
ATF4	45
FOXP1	43
GATA1::TAL1	43
KLF13	42
BCL6B	41
Dux	40
HINFP	39
POU2F2	38
Bcl6	38
CDX2	37
RFX2	37
Vdr	37
TBX1	37
NFIL3	37
MEF2B	35
FOXH1	34
Sox17	33
Arntl	33
ELF5	30
MYBL2	28
Gfi1b	28
MEF2A	27
NR3C2	26
SREBF1	26
Ddit3::Cebpa	26
ZBTB18	26
SPIB	25
TP53	25
SRF	25
Hic1;	25
SNAI2	24
PRDM1	24
NFATC1	24
EGR3	23
DUX4	22
Rfx1	21
ETV4	21
Rarb	20
Rarg	20
ZBTB33	19
RXRB	18
FOXP3	18
Nkx3-1	17
CREB3L1	15
IRF1	15
RXRG	15
NR2C2	15
PPARG	14
CREB3	13
Ascl2	13
TP73	12
GRHL1	11
CLOCK	11
BARX1	9
MAFG::NFE2L1	9
LEF1	8
PROX1	8
GLI2	7
NR3C1	7
Nr5a2	6
TBX19	5
Pax6	5
MIXL1	5
HNF1B	5
MEF2D	5
Srebf1(var.2)	4
Mecom	4
RORA(var.2)	4
POU3F2	4
TBP	4
Hes1	4
Alx4	4
RORA	3
Pitx1	3
HSF2	3
MEIS1	3
Id2	3
Creb3l2	3
RXRA::VDR	3
E2F8	2
SMAD3	2
RARA	2
FOXO4	2
ATF7	2
Arx	2
HNF1A	1
HOXB13	1
Hoxa9	1
FOS::JUND	1
E2F2	1
HES5	1
HOXA13	1
Stat4	1
NFIC::TLX1	1
DBP	1
ISX	1
TFE3	1

Motif name

Number of overlap

2368

1180

999

900

819