NAIK Genome Database

experiment name	hs_BLymphocyte_GM12878_Normal_NIPBL_SRX2458133	number of peaks	32048
antibody	NIPBL
cell line	GM12878	Number of reads	30635131
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
RUNX1	3427
SP1	3046
RUNX3	2945
ERG	2895
ETV6	2582
Esrrg	2438
Gabpa	2305
TAL1::TCF3	2189
BATF::JUN	2128
ELF1	2111
SPI1	2100
TCF4	2017
Tcf12	1959
FOS	1943
MYC	1940
ETS1	1873
MYCN	1864
ELK1	1825
TCF3	1808
MYBL1	1541
JUND	1451
NFKB1	1449
STAT1::STAT2	1365
STAT3	1351
REL	1307
Atf3	1303
MAX	1289
ZNF740	1282
ZBTB7A	1273
PBX1	1258
NFIC	1221
EGR1	1217
E2F4	1171
FOSL2	1140
E2F1	1115
JUN	1064
FOSL1	1040
PAX5	1040
NFATC1	1030
NR2F1	1025
FOS::JUN	1000
NFKB2	996
FLI1	936
EBF1	935
CTCF	889
ELF3	816
ETV1	790
ZEB1	786
MAX::MYC	782
Sox2	732
USF2	709
ELK4	694
TFAP2A	687
TFAP2A-var.2	670
EGR2	644
RELA	627
MYB	614
Esrra	612
FOXA1	579
MEF2B	565
YY1	563
MEF2A	559
TFAP4	548
RUNX2	539
CREB1	527
ELK3	525
Rxra	509
TFAP2C	508
ERF	494
NFE2	488
ETV3	465
Pparg::Rxra	464
Nfe2l2	458
BHLHE40	455
NR1H2::RXRA	443
TFDP1	440
Gata1	437
GATA3	435
KLF4	431
CEBPB	427
GATA2	421
Atf1	415
USF1	412
KLF5	397
BHLHE41	379
Tcf21	376
ZNF263	375
Ar	373
Hand1::Tcf3	373
Foxa2	368
SOX9	363
JUNB	359
E2F6	353
MAF::NFE2	348
HEY1	330
POU2F2	330
Stat5a::Stat5b	330
IRF1	329
TEAD4	323
Foxo1	314
NRF1	308
Foxj2	300
SP3	291
TBX1	285
TFAP2A-var.3	284
MAFK	277
SP2	259
Hnf4a	259
MAFF	258
CEBPA	247
Klf1	246
TEAD1	241
Gata4	240
E2F3	238
Bach1::Mafk	237
NFYB	231
NEUROD1	230
TCF7L2	228
NFYA	225
MAFG	221
STAT1	217
OTX2	211
NFATC3	209
KLF9	206
SMAD2::SMAD3::SMAD4	205
NFIA	204
TP63	204
Tcf7	203
Vdr	201
BATF3	196
Arnt	187
GATA5	186
FEV	185
THAP1	178
POU5F1B	173
CEBPD	173
GATA1::TAL1	168
HSF1	166
BCL6B	166
Nr1h3::Rxra	163
Bcl6	150
Mafb	141
SP4	141
RARA::RXRA	131
XBP1	127
ARNT::HIF1A	126
NKX3-2	120
PRDM1	119
NR3C1	118
CDX2	117
Arid3a	117
EGR4	116
SREBF1	115
Pou5f1::Sox2	115
NR4A2	108
Arntl	101
NR3C2	97
HNF4G	96
GMEB2	93
FOXP1	92
RXRB	88
EOMES	84
SREBF2	83
RXRG	83
Gmeb1	82
SRF	80
MEIS1	77
SNAI2	75
ZNF143	74
PDX1	74
ATF4	73
TP73	73
HINFP	72
ETV4	72
Ahr::Arnt	71
KLF13	70
FOXP3	70
EGR3	69
TEAD2	69
Gfi1b	66
MAFG::NFE2L1	66
HNF1B	66
SPIB	64
MEF2D	59
NFIL3	54
TP53	53
Dux	52
MYBL2	42
ELF5	41
DUX4	41
CLOCK	39
Ddit3::Cebpa	39
SCRT1	38
Rarg	37
ZBTB33	32
Hic1;	30
CREB3L1	30
Rarb	29
NR2C2	29
REST	28
FOXH1	27
Nkx3-1	27
RFX5	26
RXRA::VDR	26
Sox17	24
GLI2	23
ZBTB18	22
Srebf1(var.2)	18
CREB3	15
Pax6	15
LEF1	15
PPARG	14
RORA(var.2)	12
TBX19	12
Ascl2	11
GRHL1	11
BARX1	10
HNF1A	10
PROX1	10
Id2	9
Mecom	8
HSF2	7
FOS::JUND	7
Hoxa9	7
IRF2	7
Creb3l2	7
NFIC::TLX1	6
HOXA13	5
SMAD3	5
RARA	5
MIXL1	5
FOS::JUNB	5
RORA	5
Nr5a2	4
Hes1	4
Rfx1	3
Pitx1	3
NFAT5	2
SREBF2(var.2)	2
HOXA5	2
FOSB::JUN	2
IRF9	2
Arx	2
Stat4	2
FOS::JUN(var.2)	2
DBP	2
FOXO4	2
Stat6	1
Klf12	1
Alx4	1
HES5	1
TFEB	1
RFX2	1
SOX4	1
E2F8	1
TBP	1
ATF7	1
E2F2	1

Motif name

Number of overlap

3427

3046

2945

2895

2582