NAIK Genome Database

experiment name	hs_EmbryonicMesoderm_HUES64_normal_SMAD4_SRX702097	number of peaks	4340
antibody	SMAD4
cell line	HUES64	Number of reads	12687155
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Overlapping motifs:

Motif name	Number of overlap
E2F1	299
SP1	240
ZNF740	222
TAL1::TCF3	217
ZBTB7A	204
MYCN	191
MYC	189
EGR1	185
NR2F1	174
E2F4	174
TCF3	168
TFAP2A	158
TFAP2A-var.2	151
Tcf12	147
HEY1	146
TCF4	145
EGR2	142
ZEB1	140
YY1	137
ERG	131
MYBL1	129
SMAD2::SMAD3::SMAD4	113
Esrrg	113
Sox2	105
TFAP2C	104
STAT3	104
TFDP1	102
ELK1	101
NFKB1	97
ELF1	95
E2F6	94
RUNX1	93
NFIC	90
Gabpa	89
MAX	87
ZNF263	77
ETS1	72
NRF1	70
KLF4	69
CTCF	65
Pparg::Rxra	64
Rxra	64
TFAP2A-var.3	62
EBF1	62
GATA3	60
REL	58
Gata4	56
FEV	55
Gata1	55
ETV1	53
RELA	53
Esrra	52
MAX::MYC	51
BHLHE40	50
OTX2	50
BHLHE41	50
GATA5	48
Hand1::Tcf3	47
Ar	47
FLI1	47
Klf1	46
NFKB2	46
TEAD4	46
GATA2	45
NR1H2::RXRA	45
STAT1::STAT2	44
SOX9	44
Tcf21	43
ELK4	42
KLF5	42
THAP1	42
FOS	41
NEUROD1	40
NFATC3	40
USF2	40
RUNX3	39
KLF9	37
NR4A2	36
PBX1	36
FOXA1	35
TEAD1	35
FOSL2	34
Hnf4a	34
SP3	34
NFIA	34
USF1	32
E2F3	31
SPI1	30
JUND	29
BATF::JUN	28
Arnt	28
ELK3	27
PAX5	26
ELF3	25
TCF7L2	25
FOSL1	25
ERF	25
TFAP4	23
ETV3	23
JUN	23
HSF1	23
NR3C2	23
Atf3	23
FOS::JUN	22
TP63	22
Ahr::Arnt	21
Foxj2	21
Foxa2	21
ETV6	21
SNAI2	20
EGR4	20
RARA::RXRA	17
Gmeb1	17
CEBPA	17
GATA1::TAL1	17
Stat5a::Stat5b	17
STAT1	16
HINFP	16
CEBPB	15
CEBPD	15
SPIB	14
RUNX2	14
GMEB2	14
NFE2	14
ARNT::HIF1A	14
Tcf7	14
SMAD3	13
Arid3a	13
HNF4G	13
Bcl6	13
Atf1	12
MAFF	12
KLF13	12
EGR3	12
PDX1	12
MYB	11
POU5F1B	11
MAFG	11
BCL6B	11
Foxo1	11
CREB1	11
SP2	11
MAFK	11
RXRB	10
RXRG	10
Nfe2l2	10
Rarg	10
JUNB	9
MAF::NFE2	9
TEAD2	9
TBX1	8
Nr1h3::Rxra	8
GLI2	8
ATF4	7
Hic1;	7
PRDM1	7
IRF1	7
Bach1::Mafk	7
Gfi1b	7
Ascl2	7
SCRT1	7
ZBTB18	7
Mafb	7
SREBF2	7
NKX3-2	7
EOMES	7
CDX2	6
MEF2B	6
CREB3L1	6
FOXP1	6
SP4	6
Sox17	6
NFATC1	6
SREBF1	5
Pou5f1::Sox2	5
PROX1	5
Vdr	5
TP53	5
MYBL2	5
Arntl	4
GRHL1	4
XBP1	4
TP73	4
NFYB	4
Rarb	4
Mecom	4
ZNF143	4
NFIL3	4
BATF3	4
Nkx3-1	3
Ddit3::Cebpa	3
REST	3
ETV4	3
CLOCK	3
POU2F2	3
HOXA5	3
ZBTB33	3
Pax6	3
MEF2A	3
DUX4	2
NFYA	2
Srebf1(var.2)	2
HNF1B	2
LEF1	2
SRF	2
FOXP3	2
HOXA13	2
BARX1	2
PPARG	2
HSF2	2
MEIS1	2
FOXH1	1
SREBF2(var.2)	1
Klf12	1
RXRA::VDR	1
Id2	1
NR2C2	1
CREB3	1
Stat6	1
Nr5a2	1
NR3C1	1
Dux	1
RORA(var.2)	1
Creb3l2	1
Pitx1	1
Stat4	1
FOS::JUNB	1
E2F8	1
ELF5	1
Hes1	1
HNF1A	1
MEF2D	1
MIXL1	1
FOS::JUND	1
RFX5	1