NAIK Genome Database

experiment name	hs_EmbryonicMesoderm_HUES64_normal_SMAD4_SRX702095	number of peaks	4463
antibody	SMAD4
cell line	HUES64	Number of reads	21584983
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
SP1	962
E2F1	734
ZNF740	678
ERG	563
E2F4	560
EGR1	516
ELK1	498
Gabpa	431
ELF1	430
EGR2	395
ETS1	390
TFAP2A-var.2	378
ZBTB7A	372
Esrrg	362
TFAP2A	328
ETV1	327
MYC	306
MYCN	304
TEAD4	297
SMAD2::SMAD3::SMAD4	294
NR2F1	287
KLF5	276
TAL1::TCF3	272
TFAP2C	267
Gata4	266
Tcf12	263
TEAD1	256
TCF3	247
GATA3	238
CTCF	234
GATA5	229
ELK4	229
MYBL1	226
FOS	223
GATA2	222
TCF4	218
Gata1	207
BATF::JUN	203
ELK3	199
Sox2	199
FOSL2	194
ERF	189
MAX	182
JUND	181
FOSL1	179
JUN	178
NFIC	177
NRF1	177
Atf3	175
BHLHE40	170
TFAP2A-var.3	169
FOS::JUN	159
TFDP1	155
SP3	153
PBX1	152
E2F6	148
ETV3	147
ETV6	142
STAT3	141
FLI1	138
Klf1	137
HEY1	137
YY1	130
USF2	130
KLF4	128
ZEB1	127
SP2	125
NR1H2::RXRA	120
CREB1	119
Tcf21	117
Esrra	115
USF1	114
SP4	113
Atf1	112
E2F3	110
Hand1::Tcf3	109
MAX::MYC	101
Pparg::Rxra	101
FOXA1	100
RUNX1	99
NFKB1	95
Rxra	93
BHLHE41	90
SMAD3	89
ZNF263	88
KLF9	87
SOX9	85
ELF3	81
THAP1	80
Foxa2	76
REL	76
NFE2	74
RELA	74
BATF3	73
RUNX3	72
JUNB	70
XBP1	69
EGR4	69
Ar	69
OTX2	68
STAT1::STAT2	67
SPI1	65
EBF1	64
Nfe2l2	63
NEUROD1	63
GATA1::TAL1	61
TP63	61
PAX5	61
TCF7L2	60
Hnf4a	59
NFKB2	56
Arnt	56
MAF::NFE2	55
TFAP4	52
Bach1::Mafk	51
NFIA	49
NFATC3	48
Tcf7	47
NFYB	46
NKX3-2	46
Foxj2	45
RARA::RXRA	44
EGR3	44
MAFF	43
GMEB2	42
CEBPD	42
CEBPA	41
CEBPB	41
TEAD2	39
NFYA	39
Foxo1	38
MAFG	37
Sox17	37
ARNT::HIF1A	35
Nr1h3::Rxra	35
RUNX2	34
Arntl	33
FEV	31
Ahr::Arnt	31
HNF4G	30
POU5F1B	30
HINFP	29
SNAI2	29
FOXP1	28
EOMES	28
Mafb	28
ETV4	27
KLF13	26
NR4A2	25
NR3C2	25
PRDM1	24
HSF1	24
MAFK	24
MYB	22
FOXH1	22
NFIL3	20
TP53	20
REST	20
PDX1	20
RXRB	19
ZNF143	19
CLOCK	19
TP73	18
Gmeb1	17
RXRG	17
SREBF2	16
CDX2	16
ZBTB33	15
STAT1	15
Pou5f1::Sox2	13
ELF5	12
TBX1	12
NR2C2	12
MEF2B	12
Stat5a::Stat5b	12
IRF1	11
SREBF1	11
FOXP3	11
BCL6B	11
ATF4	11
LEF1	10
Mecom	10
NFATC1	10
Bcl6	10
MEF2A	10
SRF	10
RFX5	10
Arid3a	10
GRHL1	10
Hic1;	9
Gfi1b	9
Ddit3::Cebpa	9
Dux	9
Ascl2	8
MYBL2	8
Hes1	7
NR3C1	6
CREB3L1	6
SPIB	6
Nkx3-1	6
GLI2	6
SCRT1	6
ZBTB18	5
PROX1	5
Vdr	5
Creb3l2	5
Id2	5
MAFG::NFE2L1	5
POU2F2	5
CREB3	4
MEF2D	4
Sox1	3
Rarg	2
Nr5a2	2
HSF2	2
RARA	2
RXRA::VDR	2
Rarb	2
DUX4	2
Stat4	1
HES5	1
MEIS1	1
PPARG	1
NFIC::TLX1	1
RFX2	1
HNF1B	1
ATF7	1
Pitx1	1
IRF2	1
TBX19	1
HOXA13	1
ESR1	1
BARX1	1
IRF9	1
E2F8	1
MIXL1	1
Pax6	1
HOXB13	1
NFAT5	1

Motif name

Number of overlap

962

734

678

563

560