NAIK Genome Database

experiment name	hs_EmbryonicKidney_HEK293T_NormalOrCancer_SMC3_SRX235608	number of peaks	508993
antibody	SMC3
cell line	HEK293T	Number of reads	118047865
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	8959
MYC	2460
MYCN	2266
Tcf12	1842
SP1	1756
TCF4	1463
ZEB1	1282
TAL1::TCF3	1270
NFIC	1180
TCF3	1007
NR2F1	937
ZBTB7A	892
E2F4	824
MYBL1	788
ZNF740	786
E2F1	757
RUNX1	680
RUNX3	663
Sox2	661
TFAP2A-var.2	652
STAT3	640
Gabpa	637
MAX	621
ERG	610
TFAP2A	603
EGR1	578
TFAP2C	569
ELF1	563
Esrrg	546
EGR2	471
YY1	463
ELK1	459
MAX::MYC	435
FOXA1	421
NR1H2::RXRA	382
TEAD4	358
TFAP4	356
Rxra	355
Pparg::Rxra	349
NEUROD1	337
BHLHE41	329
ZNF263	328
NFKB1	314
Foxa2	301
KLF4	301
NRF1	300
Gata1	297
TFAP2A-var.3	296
E2F6	293
GATA3	289
Nr1h3::Rxra	280
THAP1	279
KLF5	273
ETS1	272
Ar	268
EBF1	256
FOS	254
USF2	246
OTX2	243
USF1	228
Hnf4a	228
BHLHE40	224
E2F3	223
ETV1	218
Arid3a	217
TEAD1	216
SOX9	206
CEBPB	200
Gata4	198
STAT1::STAT2	197
PAX5	196
Esrra	195
GATA2	195
Tcf21	195
PBX1	191
REL	189
NFIA	184
FOSL2	180
RELA	174
BATF::JUN	171
KLF9	164
SMAD2::SMAD3::SMAD4	164
SPI1	160
ELF3	159
Klf1	158
Atf3	155
SP4	155
ELK4	153
SP3	151
JUND	148
FLI1	147
NFKB2	142
NKX3-2	141
FOSL1	141
CEBPD	139
GATA5	138
POU5F1B	138
Foxj2	135
JUN	127
ETV6	119
TCF7L2	119
ETV3	114
Hand1::Tcf3	109
TFDP1	107
Pou5f1::Sox2	106
Arnt	106
ELK3	106
FOS::JUN	105
CEBPA	105
Tcf7	102
MAFK	98
EOMES	98
CREB1	96
ARNT::HIF1A	96
STAT1	96
TP63	91
PDX1	90
ERF	90
RUNX2	87
Atf1	86
HEY1	86
Mafb	86
RARA::RXRA	85
Foxo1	82
HSF1	82
BCL6B	79
TEAD2	79
HNF4G	79
MYBL2	70
GATA1::TAL1	69
SP2	69
MEF2B	68
EGR4	68
KLF13	68
SNAI2	67
CDX2	66
MAFF	66
Stat5a::Stat5b	64
MYB	62
NFATC3	62
TP53	60
FOXP1	60
Bcl6	60
NFE2	60
Bach1::Mafk	56
Ahr::Arnt	54
Vdr	54
MEF2A	53
MAF::NFE2	52
Gfi1b	49
Nfe2l2	49
NFYB	48
ZBTB18	46
NR4A2	46
BATF3	44
MAFG	43
FEV	42
SCRT1	41
REST	41
NFYA	41
PRDM1	40
Nkx3-1	40
NR3C2	40
ZNF143	38
EGR3	38
XBP1	37
Hic1;	35
ATF4	34
TBX1	33
HINFP	33
POU2F2	31
JUNB	28
PPARG	28
NFIL3	27
IRF1	26
SRF	26
Dux	24
ELF5	24
SPIB	21
FOXH1	21
Ddit3::Cebpa	20
RXRG	20
NR3C1	20
RXRB	19
FOXP3	19
RFX5	19
NFATC1	19
Ascl2	18
Arntl	18
DUX4	18
GRHL1	15
SREBF1	14
ZBTB33	14
SREBF2	14
Rarg	13
Sox17	12
GLI2	11
Gmeb1	10
CLOCK	10
TBX19	9
TP73	9
GMEB2	9
MAFG::NFE2L1	8
RXRA::VDR	8
Mecom	8
Rarb	8
HNF1B	7
CREB3L1	7
RARA	7
NR2C2	7
MEF2D	6
Pax6	6
ETV4	6
LEF1	6
PROX1	4
MEIS1	4
SMAD3	4
RORA	3
RORA(var.2)	3
RFX2	2
FOS::JUND	2
Srebf1(var.2)	2
BARX1	2
Nr5a2	2
CREB3	2
TFE3	2
Creb3l2	2
MIXL1	2
FOSB::JUN	1
IRF2	1
Sox1	1
FOS::JUN(var.2)	1
Id2	1
Myod1	1
Klf12	1
Alx4	1
HES5	1
POU3F2	1
HOXA5	1

Motif name

Number of overlap

8959

2460

2266

1842

1756