NAIK Genome Database

experiment name	hs_ColorectalCarcinoma_HCT116_cancer_HNF4A_SRX748426	number of peaks	7740
antibody	HNF4A	link to motif view if antibody and consensus motif is the same
cell line	HCT116	Number of reads	18293574
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
Hnf4a	2477
NR2F1	1097
FOS	1024
Rxra	878
NR1H2::RXRA	854
HNF4G	836
BATF::JUN	822
FOSL2	813
JUND	791
JUN	697
FOSL1	692
FOS::JUN	660
Pparg::Rxra	652
Atf3	650
Esrra	394
PBX1	360
SP1	353
MYC	337
ERG	317
TCF7L2	311
TEAD4	305
Gabpa	297
MYCN	294
Tcf12	293
Tcf7	293
ZBTB7A	285
ELF1	273
CTCF	267
Sox2	255
NFIC	250
TFAP2A	248
JUNB	238
ZEB1	230
TAL1::TCF3	228
FOXA1	222
RUNX1	220
TEAD1	219
MAX	216
CEBPB	207
Esrrg	200
TCF4	195
TFAP2C	194
GATA3	192
Foxa2	192
NFE2	188
TCF3	186
ELK1	183
STAT3	183
CEBPA	179
MYBL1	173
Gata4	166
ZNF740	162
Nfe2l2	159
Gata1	159
CEBPD	156
GATA5	150
SOX9	149
Ar	145
GATA2	142
EGR1	140
USF1	132
MAX::MYC	131
ETS1	128
KLF4	128
MAFF	127
EGR2	126
TFAP2A-var.2	124
CDX2	122
ELF3	120
USF2	117
NR2C2	117
E2F4	113
MAF::NFE2	111
RUNX3	108
RXRB	108
KLF5	107
RXRG	107
MAFG	100
TFAP4	99
Tcf21	98
ELK4	96
MAFK	93
CREB1	93
HEY1	92
FLI1	91
NFKB1	87
YY1	84
E2F1	79
Bach1::Mafk	77
Nr1h3::Rxra	77
ETV1	77
SPI1	77
NFIA	75
RARA::RXRA	72
BHLHE40	72
TP63	72
ERF	71
Arid3a	69
RELA	67
BHLHE41	67
REL	66
ETV3	64
EBF1	60
RUNX2	60
ZNF263	58
ETV6	58
OTX2	57
NFIL3	56
Vdr	54
STAT1::STAT2	54
TFDP1	50
MYBL2	50
GATA1::TAL1	46
ELK3	46
Mafb	45
Arnt	44
Foxj2	43
TFAP2A-var.3	43
THAP1	43
NRF1	42
KLF9	42
NR3C2	41
ATF4	41
NEUROD1	40
NKX3-2	40
HSF1	39
MYB	39
E2F6	39
NR4A2	38
PAX5	38
POU5F1B	37
Atf1	36
Klf1	35
Pou5f1::Sox2	35
BATF3	35
TEAD2	34
PDX1	33
Hand1::Tcf3	33
Foxo1	33
FEV	32
NFKB2	32
Stat5a::Stat5b	31
Ddit3::Cebpa	31
NFYA	30
NFYB	28
TP73	27
SP3	27
Ahr::Arnt	27
NFATC3	26
ARNT::HIF1A	26
FOXP1	26
Gfi1b	25
REST	24
MAFG::NFE2L1	24
EOMES	23
SP2	22
RXRA::VDR	22
ZNF143	22
PRDM1	22
STAT1	22
Dux	22
MEF2B	21
SMAD2::SMAD3::SMAD4	20
ETV4	20
SPIB	18
MEF2A	18
SRF	17
TP53	17
TBX1	16
RARA	15
Gmeb1	15
Bcl6	14
Nkx3-1	14
NR3C1	14
BCL6B	13
NFATC1	13
HNF1B	13
Sox17	13
FOXH1	13
E2F3	12
IRF1	11
Hic1;	11
Mecom	10
DUX4	10
EGR4	10
ELF5	9
SCRT1	9
Arntl	9
Srebf1(var.2)	8
LEF1	7
MEF2D	7
XBP1	7
EGR3	7
FOS::JUND	6
SNAI2	6
ZBTB33	6
PPARG	6
GMEB2	6
TBX19	6
SREBF1	5
Rarb	5
FOXP3	5
GRHL1	5
CREB3L1	5
FOS::JUNB	5
Arx	5
SREBF2	5
ZBTB18	5
RORA	5
MEIS1	5
RORA(var.2)	4
RFX5	4
Rarg	4
SP4	4
GLI2	4
KLF13	3
HSF2	3
FOXO4	3
POU2F2	3
HINFP	3
Nr5a2	3
BARX1	3
HNF1A	3
NFAT5	2
Pitx1	2
Ascl2	2
CREB3	2
Pax6	2
Alx4	2
CLOCK	2
DBP	2
SMAD3	1
NKX2-3	1
Hoxa11	1
Hoxa9	1
Rfx1	1
Nkx2-5-var.2	1
HOXA5	1
HOXA13	1
TFE3	1

Motif name

Number of overlap

2477

1097

1024

878

854