NAIK Genome Database

experiment name	hs_ColorectalCarcinoma_HCT116_cancer_CTCF_SRX345867	number of peaks	51187
antibody	CTCF	link to motif view if antibody and consensus motif is the same
cell line	HCT116	Number of reads	9855205
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	15931
MYC	3750
MYCN	3331
Tcf12	2637
SP1	2541
TCF4	2195
ZEB1	1877
TAL1::TCF3	1772
NFIC	1676
TCF3	1406
NR2F1	1394
ZBTB7A	1218
ZNF740	1159
E2F4	1026
RUNX3	959
MYBL1	949
E2F1	947
MAX	924
RUNX1	898
STAT3	897
Gabpa	897
TFAP2C	896
Sox2	894
TFAP2A-var.2	876
EGR1	843
ELF1	821
TFAP2A	800
ERG	764
YY1	713
MAX::MYC	707
Esrrg	682
EGR2	635
FOXA1	571
ELK1	565
NR1H2::RXRA	563
TFAP4	538
TEAD4	524
Rxra	478
BHLHE41	466
TFAP2A-var.3	463
Pparg::Rxra	459
NEUROD1	458
NRF1	435
ZNF263	427
NFKB1	419
EBF1	411
KLF4	402
Foxa2	392
E2F6	391
Nr1h3::Rxra	385
Gata1	374
ETS1	366
USF2	365
USF1	361
THAP1	352
OTX2	336
Ar	328
GATA3	325
BHLHE40	308
Arid3a	307
Hnf4a	294
KLF5	292
TEAD1	282
E2F3	280
FOS	272
Esrra	260
PAX5	259
Tcf21	258
NFIA	256
STAT1::STAT2	255
PBX1	248
Gata4	247
ETV1	246
SOX9	240
CEBPB	235
SP4	230
SMAD2::SMAD3::SMAD4	228
GATA2	215
FOSL2	209
BATF::JUN	206
ELF3	204
SPI1	204
Atf3	204
REL	202
NKX3-2	192
POU5F1B	190
FLI1	184
FOSL1	181
JUND	178
RELA	177
Klf1	176
Foxj2	172
Arnt	166
CEBPD	161
ELK4	159
NFKB2	158
KLF9	157
GATA5	154
EOMES	153
TCF7L2	153
Pou5f1::Sox2	147
CREB1	145
Hand1::Tcf3	145
JUN	144
ARNT::HIF1A	141
PDX1	141
CEBPA	139
MAFK	138
Tcf7	137
ETV3	129
STAT1	129
RARA::RXRA	126
HNF4G	120
SP3	117
Foxo1	117
RUNX2	116
ETV6	116
FOS::JUN	116
KLF13	114
Atf1	113
HSF1	112
TEAD2	107
TP63	105
Mafb	104
BCL6B	103
ELK3	101
CDX2	100
Bach1::Mafk	97
FOXP1	95
HEY1	95
TFDP1	93
SNAI2	90
Bcl6	87
EGR4	86
ERF	85
MYBL2	85
MAFF	82
SP2	81
MYB	81
NFE2	76
Vdr	72
Nfe2l2	72
GATA1::TAL1	71
SCRT1	68
MAF::NFE2	67
Stat5a::Stat5b	67
ZNF143	65
TP53	64
NFATC3	64
MEF2A	62
MEF2B	62
MAFG	60
BATF3	59
Gfi1b	57
ZBTB18	55
HINFP	55
Ahr::Arnt	54
Nkx3-1	51
PRDM1	48
FEV	47
Hic1;	47
SRF	47
NR4A2	47
REST	46
NR3C2	46
TBX1	45
EGR3	44
JUNB	41
ATF4	39
POU2F2	38
NFYB	37
PPARG	37
NFIL3	35
IRF1	35
NFYA	34
FOXH1	33
FOXP3	33
RXRB	29
ELF5	29
SPIB	27
NFATC1	27
RXRG	25
RFX5	25
Ddit3::Cebpa	25
Ascl2	24
Arntl	23
XBP1	23
Sox17	21
NR3C1	19
SREBF2	18
Dux	17
SREBF1	17
GRHL1	16
NR2C2	16
RXRA::VDR	16
GLI2	15
DUX4	15
Gmeb1	15
MEF2D	14
Rarb	11
MEIS1	11
Srebf1(var.2)	11
Rarg	10
Mecom	9
TP73	9
CREB3L1	8
PROX1	8
HNF1B	8
Nr5a2	7
RARA	6
Pax6	6
LEF1	6
ZBTB33	6
GMEB2	6
CLOCK	6
ETV4	5
MAFG::NFE2L1	4
Hes1	3
SMAD3	3
MIXL1	3
POU3F2	3
Pitx1	3
TBX19	3
NFIC::TLX1	3
RFX2	2
CREB3	2
Alx4	2
TFE3	2
Hoxa9	2
Sox1	2
Creb3l2	2
HNF1A	2
RORA(var.2)	2
HES5	1
Rfx1	1
NKX2-8	1
FOS::JUND	1
DBP	1

Motif name

Number of overlap

15931

3750

3331

2637

2541