NAIK Genome Database

experiment name	hs_ColorectalCarcinoma_HCT116_cancer_CTCF_SRX345866	number of peaks	52803
antibody	CTCF	link to motif view if antibody and consensus motif is the same
cell line	HCT116	Number of reads	14021349
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	11286
MYC	2748
MYCN	2432
Tcf12	1947
SP1	1854
TCF4	1695
ZEB1	1434
TAL1::TCF3	1353
NFIC	1214
TCF3	1062
NR2F1	1025
ZBTB7A	878
ZNF740	841
E2F4	777
Sox2	689
RUNX3	688
MYBL1	687
MAX	669
RUNX1	666
E2F1	655
Gabpa	645
STAT3	640
TFAP2C	636
EGR1	607
TFAP2A-var.2	604
ELF1	581
ERG	544
MAX::MYC	528
TFAP2A	522
EGR2	486
Esrrg	476
YY1	466
ELK1	434
FOXA1	415
TFAP4	395
NR1H2::RXRA	389
TEAD4	380
BHLHE41	353
NEUROD1	352
Rxra	334
ZNF263	330
NFKB1	320
Pparg::Rxra	311
TFAP2A-var.3	307
KLF4	304
Foxa2	300
NRF1	293
Gata1	291
Nr1h3::Rxra	291
GATA3	284
USF2	281
E2F6	277
EBF1	261
ETS1	255
THAP1	253
USF1	251
Arid3a	247
OTX2	246
Ar	241
BHLHE40	227
KLF5	221
FOS	221
TEAD1	218
E2F3	203
NFIA	203
Tcf21	199
PBX1	197
STAT1::STAT2	196
Hnf4a	194
CEBPB	186
Esrra	183
PAX5	181
Gata4	177
ETV1	176
SOX9	174
FOSL2	170
GATA2	162
SP4	162
BATF::JUN	161
Atf3	157
FOSL1	155
SMAD2::SMAD3::SMAD4	155
NKX3-2	152
SPI1	151
ELF3	146
FLI1	146
REL	145
JUND	135
Klf1	131
RELA	128
CEBPD	125
Foxj2	124
POU5F1B	123
TCF7L2	122
NFKB2	121
GATA5	120
CEBPA	114
KLF9	114
ELK4	112
JUN	110
Hand1::Tcf3	108
SP3	106
Tcf7	103
Arnt	102
FOS::JUN	99
TEAD2	98
CREB1	97
PDX1	97
EOMES	95
MAFK	95
ETV6	94
Pou5f1::Sox2	91
RARA::RXRA	90
ETV3	89
ARNT::HIF1A	85
TFDP1	84
STAT1	82
HNF4G	82
RUNX2	82
KLF13	80
Foxo1	80
ELK3	80
BCL6B	78
Atf1	78
Mafb	76
TP63	76
HSF1	73
SNAI2	72
ERF	71
Bach1::Mafk	65
HEY1	63
SP2	63
MYB	63
MAFF	61
MYBL2	60
FOXP1	59
GATA1::TAL1	58
EGR4	57
Bcl6	57
Stat5a::Stat5b	56
Vdr	56
CDX2	56
NFE2	52
SCRT1	50
ZBTB18	47
Nfe2l2	47
TP53	47
MAF::NFE2	45
MEF2A	44
NFATC3	44
MEF2B	44
Gfi1b	43
HINFP	42
REST	41
Nkx3-1	41
ZNF143	41
Ahr::Arnt	40
MAFG	40
FEV	38
Hic1;	38
PRDM1	35
NR3C2	35
PPARG	34
BATF3	34
SRF	34
JUNB	32
TBX1	32
EGR3	30
POU2F2	30
NFYB	30
NFIL3	29
IRF1	28
FOXP3	27
ELF5	27
NFYA	26
NR4A2	26
SPIB	25
ATF4	23
RXRB	23
RXRG	23
FOXH1	22
XBP1	21
Ascl2	19
Dux	19
SREBF2	19
Ddit3::Cebpa	18
NFATC1	17
RFX5	16
GRHL1	15
Arntl	14
ZBTB33	12
Rarb	12
NR2C2	11
Gmeb1	11
Sox17	11
GLI2	10
DUX4	10
HNF1B	10
SREBF1	10
Rarg	9
NR3C1	9
MEIS1	8
LEF1	8
PROX1	7
RXRA::VDR	7
TP73	6
MEF2D	6
Hoxa9	5
Srebf1(var.2)	5
Mecom	5
CREB3L1	5
CLOCK	4
RORA(var.2)	4
Pax6	4
MAFG::NFE2L1	4
Alx4	3
Hes1	3
TBX19	3
Nr5a2	3
ETV4	3
POU3F2	3
GMEB2	2
MIXL1	2
RARA	2
RORA	2
HNF1A	1
Creb3l2	1
CREB3	1
NFIC::TLX1	1
BARX1	1
FOS::JUND	1
DBP	1
IRF2	1
RFX2	1
Pitx1	1
E2F2	1
SMAD3	1
NKX2-8	1
TFE3	1

Motif name

Number of overlap

11286

2748

2432

1947

1854