NAIK Genome Database

experiment name	hs_ColorectalCarcinoma_HCT116_cancer_CTCF_SRX345864	number of peaks	47356
antibody	CTCF	link to motif view if antibody and consensus motif is the same
cell line	HCT116	Number of reads	9060919
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	7609
MYC	1834
MYCN	1639
Tcf12	1416
SP1	1307
TCF4	1179
ZEB1	1038
TAL1::TCF3	988
NFIC	887
TCF3	781
NR2F1	721
ZBTB7A	601
ZNF740	576
E2F4	550
MYBL1	527
RUNX3	515
Sox2	467
RUNX1	466
TFAP2C	462
E2F1	460
TFAP2A-var.2	447
STAT3	445
Gabpa	431
EGR1	388
TFAP2A	385
MAX	380
ERG	363
ELF1	362
Esrrg	346
EGR2	336
YY1	325
MAX::MYC	310
ELK1	301
FOXA1	277
TFAP4	276
NR1H2::RXRA	271
TEAD4	265
NEUROD1	253
BHLHE41	244
TFAP2A-var.3	236
Rxra	230
ZNF263	222
Pparg::Rxra	221
NFKB1	213
Foxa2	209
Nr1h3::Rxra	203
OTX2	202
KLF4	201
NRF1	197
E2F6	194
EBF1	191
Arid3a	191
Gata1	187
THAP1	184
GATA3	170
ETS1	170
E2F3	164
USF1	162
TEAD1	157
FOS	150
USF2	148
Esrra	147
Hnf4a	145
Ar	143
SOX9	139
PAX5	131
Tcf21	130
KLF5	126
STAT1::STAT2	126
NFIA	125
CEBPB	124
BHLHE40	124
PBX1	121
SMAD2::SMAD3::SMAD4	119
SP4	118
Gata4	114
BATF::JUN	110
ETV1	105
FOSL2	104
REL	103
GATA2	102
Atf3	101
SPI1	95
Foxj2	94
ELF3	94
NKX3-2	93
POU5F1B	93
CEBPD	91
FOSL1	88
TCF7L2	87
RELA	86
FLI1	83
JUND	83
CREB1	82
NFKB2	80
GATA5	80
Arnt	78
Klf1	77
KLF9	77
EOMES	76
JUN	75
Hand1::Tcf3	74
STAT1	74
SP3	71
ELK4	70
Pou5f1::Sox2	70
Tcf7	69
ARNT::HIF1A	68
PDX1	68
MAFK	67
HNF4G	66
KLF13	65
RARA::RXRA	63
Foxo1	62
ETV3	62
RUNX2	61
Vdr	60
ETV6	60
Atf1	58
FOS::JUN	56
CDX2	56
CEBPA	55
TEAD2	53
TFDP1	52
EGR4	51
Mafb	51
HEY1	48
BCL6B	47
TP63	46
SP2	46
FOXP1	44
MYB	42
ELK3	42
SNAI2	40
HSF1	39
Bach1::Mafk	38
FEV	37
Stat5a::Stat5b	37
TP53	37
MEF2A	37
MYBL2	36
ERF	35
Ahr::Arnt	35
MEF2B	34
MAFF	34
SCRT1	34
Bcl6	33
Gfi1b	32
GATA1::TAL1	32
ZNF143	31
Nkx3-1	30
NFATC3	30
BATF3	29
NR3C2	28
ZBTB18	28
EGR3	28
Hic1;	27
TBX1	26
HINFP	26
Nfe2l2	25
NR4A2	25
REST	25
NFIL3	24
NFE2	23
NFYA	23
PRDM1	23
SRF	23
MAFG	22
NFYB	21
MAF::NFE2	21
FOXP3	20
POU2F2	20
ATF4	20
PPARG	17
JUNB	17
IRF1	17
NFATC1	16
Dux	15
SPIB	15
Ascl2	14
DUX4	14
RXRB	13
XBP1	13
NR3C1	13
GLI2	12
FOXH1	12
RXRG	11
Ddit3::Cebpa	11
RFX5	10
ELF5	10
SREBF2	10
Gmeb1	9
TP73	9
GRHL1	9
RXRA::VDR	8
SREBF1	8
HNF1B	8
NR2C2	8
Arntl	7
Rarg	7
Sox17	7
Rarb	6
MEIS1	5
CREB3L1	5
ZBTB33	5
Srebf1(var.2)	5
LEF1	5
Mecom	5
MEF2D	4
RORA(var.2)	4
Nr5a2	4
TBX19	3
GMEB2	3
RARA	3
Rfx1	2
SMAD3	2
CLOCK	2
Hes1	2
Pax6	2
Creb3l2	2
FOS::JUND	2
PROX1	1
IRF2	1
Alx4	1
HNF1A	1
RORA	1
RFX2	1
BARX1	1
Hoxa9	1
Pitx1	1
Sox1	1
ETV4	1
MAFG::NFE2L1	1
NKX2-8	1
FOS::JUNB	1
E2F2	1

Motif name

Number of overlap

7609

1834

1639

1416

1307