NAIK Genome Database

experiment name	hs_ColorectalCarcinoma_HCT116_cancer_CDK9_SRX1177906	number of peaks	44453
antibody	CDK9
cell line	HCT116	Number of reads	18867418
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Overlapping motifs:

Motif name	Number of overlap
SP1	2688
E2F1	1747
MYCN	1743
TFAP2A-var.2	1501
ZNF740	1500
EGR1	1421
TFAP2A	1254
MYC	1211
TAL1::TCF3	924
MAX	910
TCF4	833
NRF1	794
CTCF	778
E2F4	727
TFAP2C	727
EGR2	725
TCF3	719
Tcf12	709
MAX::MYC	636
ZBTB7A	626
TFAP2A-var.3	620
ERG	609
NR2F1	564
BHLHE41	511
ZEB1	510
E2F6	508
Esrrg	505
KLF5	498
ELF1	498
Gabpa	452
ELK1	362
ETS1	357
Klf1	345
YY1	336
KLF4	333
SP3	319
BHLHE40	313
TFDP1	287
SNAI2	284
NFKB1	281
ETV1	271
NFIC	247
KLF9	246
ZNF263	241
MYBL1	240
RUNX1	239
HEY1	235
USF2	231
USF1	228
Esrra	226
EBF1	218
REL	203
Sox2	184
STAT3	171
NFKB2	167
SP4	159
SP2	159
ELK4	152
Tcf21	152
EGR4	150
ELK3	145
NEUROD1	144
Arnt	142
FLI1	142
THAP1	140
E2F3	139
ARNT::HIF1A	127
Hnf4a	123
FOS	121
RELA	113
ERF	112
Ar	111
CREB1	108
SMAD2::SMAD3::SMAD4	108
OTX2	105
NR1H2::RXRA	103
SOX9	100
Pparg::Rxra	99
Rxra	98
TEAD4	95
TEAD1	95
ETV6	93
FOSL2	90
JUND	88
NFYB	88
RUNX3	86
PAX5	85
EGR3	82
NFYA	81
BATF::JUN	79
FOXA1	79
FOSL1	79
SPI1	76
Hand1::Tcf3	76
NFATC3	74
Atf1	74
NFIA	73
PBX1	70
Ahr::Arnt	69
ETV3	69
TFAP4	69
JUN	67
FOS::JUN	65
POU5F1B	64
KLF13	64
HINFP	62
STAT1::STAT2	59
Gata1	57
Atf3	55
ELF3	49
Foxa2	49
HNF4G	49
BATF3	46
FEV	44
TCF7L2	44
RARA::RXRA	43
CEBPD	41
Arntl	39
RUNX2	39
CEBPB	39
XBP1	38
REST	37
GATA2	37
GATA3	37
Hic1;	36
Tcf7	35
GMEB2	34
NFE2	32
Nr1h3::Rxra	32
Gata4	31
Bach1::Mafk	30
GATA5	30
Nfe2l2	29
Foxj2	28
NR4A2	27
NR3C2	26
ZBTB33	26
MAF::NFE2	25
STAT1	25
ZNF143	23
CLOCK	22
CEBPA	22
SCRT1	22
TP63	21
FOXH1	21
Gmeb1	20
Pou5f1::Sox2	20
CREB3L1	20
EOMES	20
JUNB	19
BCL6B	19
GATA1::TAL1	19
MAFK	17
MYB	17
MAFF	16
FOXP1	16
MAFG	16
HSF1	16
IRF1	15
Bcl6	15
Foxo1	14
PDX1	14
NR2C2	14
Stat5a::Stat5b	14
FOXP3	12
ETV4	12
GLI2	12
TEAD2	12
LEF1	11
NFIL3	11
Mafb	11
NKX3-2	11
RXRB	10
SRF	10
Ascl2	9
MEF2A	8
MEF2B	8
PRDM1	8
SREBF2	8
RXRG	8
RFX5	8
CDX2	7
Sox17	7
SPIB	6
TBX1	6
TP73	5
Vdr	5
TP53	5
Rarg	5
Nr5a2	5
POU2F2	5
NR3C1	5
NFATC1	5
ATF4	5
SREBF1	5
ZBTB18	4
RXRA::VDR	4
Pax6	4
HNF1B	4
MEF2D	4
CREB3	3
Ddit3::Cebpa	3
Rarb	3
Id2	3
PROX1	3
SMAD3	3
ELF5	3
GRHL1	3
Nkx3-1	2
Dux	2
DUX4	2
Rfx1	1
HNF1A	1
HSF2	1
MAFG::NFE2L1	1
Hes1	1
Creb3l2	1
HOXA13	1
BARX1	1
Nkx2-5-var.2	1
E2F8	1
POU3F2	1
MYBL2	1
MIXL1	1
Pitx1	1
Gfi1b	1
Arid3a	1
Tcfl5	1
TFEB	1