NAIK Genome Database

experiment name	hs_ColonAdenocarcinoma_LoVo_undef_SMAD1_SRX335311	number of peaks	1962
antibody	SMAD1
cell line	LOVO	Number of reads	13235402
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Overlapping motifs:

Motif name	Number of overlap
FOXA1	156
FOS	129
Foxa2	107
BATF::JUN	104
CDX2	101
GATA3	99
Hnf4a	98
JUND	87
FOS::JUN	84
JUN	84
FOSL2	83
GATA5	79
FOSL1	74
ERG	72
Gata4	72
Sox2	69
Atf3	67
Esrrg	57
NR2F1	56
ELF1	53
Ar	52
CEBPB	51
GATA2	49
Gata1	45
Gabpa	44
SOX9	41
PBX1	40
Rxra	40
NR1H2::RXRA	39
STAT3	38
KLF5	36
JUNB	35
TCF7L2	34
TEAD4	33
MYC	33
CEBPA	33
KLF4	33
ZBTB7A	32
NFIC	31
ELF3	31
TEAD1	30
SP1	30
Esrra	30
RUNX1	29
Tcf7	28
TFAP2A	27
MYCN	27
STAT1::STAT2	27
NFE2	26
FOXP1	25
Foxj2	24
MYBL1	24
Nfe2l2	24
Pparg::Rxra	23
Tcf12	23
Nkx3-1	23
ZEB1	22
NKX3-2	22
TP63	21
Mecom	20
CEBPD	20
ELK1	20
SMAD2::SMAD3::SMAD4	18
HNF4G	18
MAX	18
CTCF	18
TCF4	17
TAL1::TCF3	17
CREB1	17
ZNF740	16
MYBL2	16
MAFK	16
MAX::MYC	16
SPI1	16
Klf1	16
Foxo1	16
FEV	15
EGR1	15
YY1	15
ETV1	15
MAFG	14
EGR2	14
HOXA13	14
TFAP2C	14
RUNX3	14
MAF::NFE2	14
TCF3	14
HNF1B	13
ETS1	13
MAFF	13
ELK4	12
ATF4	12
E2F4	12
Nr1h3::Rxra	12
POU5F1B	12
OTX2	12
NFKB1	11
Pou5f1::Sox2	11
ETV3	11
GATA1::TAL1	11
USF1	11
FLI1	11
Bach1::Mafk	11
TFDP1	11
RELA	10
Mafb	10
NR3C2	10
ZNF263	10
NFIL3	10
ERF	10
Atf1	10
TP73	9
NFIA	9
PDX1	9
PRDM1	9
EBF1	9
KLF9	9
Gfi1b	8
SCRT1	8
HEY1	8
RXRB	8
Vdr	8
NR4A2	8
Arid3a	8
TFAP2A-var.2	8
BHLHE41	8
RXRG	8
ETV6	8
ETV4	7
REL	7
BATF3	7
RUNX2	7
SPIB	7
Gmeb1	7
E2F6	6
E2F1	6
Ahr::Arnt	6
RARA::RXRA	6
PAX5	6
TFAP2A-var.3	6
HSF1	6
TFAP4	6
HNF1A	6
ELK3	5
SP3	5
Srebf1(var.2)	5
MEF2B	5
FOXO4	5
USF2	5
Tcf21	4
NRF1	4
Stat5a::Stat5b	4
RORA(var.2)	4
Ddit3::Cebpa	4
TP53	4
BHLHE40	4
TEAD2	3
NFYA	3
Arx	3
BARX1	3
MEF2A	3
NFKB2	3
Hand1::Tcf3	3
NFYB	3
Arnt	3
NR2C2	3
NEUROD1	3
STAT1	3
NR3C1	3
NFATC3	3
CREB3L1	3
MYB	3
Pitx1	3
E2F3	3
TBX1	2
RXRA::VDR	2
IRF1	2
DUX4	2
Rarg	2
MEIS1	2
ELF5	2
Dux	2
NFATC1	2
ARNT::HIF1A	2
HSF2	2
EOMES	2
MEF2D	2
ZNF143	2
MAFG::NFE2L1	2
FOS::JUN(var.2)	1
RFX5	1
HOXA5	1
GMEB2	1
Nkx2-5-var.2	1
Sox17	1
HINFP	1
POU2F2	1
THAP1	1
BCL6B	1
E2F8	1
KLF13	1
LEF1	1
Hic1;	1
Pax6	1
SP4	1
Nr5a2	1
REST	1
SRF	1
EGR4	1
Arntl	1
GLI2	1
RORA	1
GRHL1	1
DBP	1