NAIK Genome Database

experiment name	hs_ColonAdenocarcinoma_LoVo_undef_RORA_SRX335309	number of peaks	35543
antibody	RORA	link to motif view if antibody and consensus motif is the same
cell line	LOVO	Number of reads	41569286
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Overlapping motifs:

Motif name	Number of overlap
RORA(var.2)	1094
FOXA1	508
RORA	361
Sox2	331
FOS	321
Foxa2	309
GATA3	254
ERG	251
Ar	221
BATF::JUN	203
Gata4	198
Esrrg	195
CEBPB	191
Gata1	189
JUND	189
ELF1	185
Gabpa	180
Hnf4a	179
GATA5	173
FOSL2	168
MYC	166
CTCF	165
NR2F1	157
GATA2	154
MAX	151
FOS::JUN	148
ZBTB7A	148
RUNX1	147
JUN	146
STAT3	145
MYCN	140
CDX2	138
PBX1	138
FOSL1	133
MYBL1	130
ELK1	122
NFIC	115
ELF3	114
Tcf12	108
SP1	107
TAL1::TCF3	104
SPI1	104
TCF4	100
Atf3	99
ETS1	97
TEAD4	94
Rxra	89
SOX9	85
KLF4	85
TCF3	81
Esrra	78
USF1	78
YY1	73
RUNX3	72
ERF	72
TFAP2A	72
ELK4	69
Pparg::Rxra	68
POU5F1B	66
MAX::MYC	63
ETV1	62
MAFK	62
ETV6	62
OTX2	61
TEAD1	60
E2F4	60
CEBPA	60
NFKB1	59
NR1H2::RXRA	58
TCF7L2	56
GATA1::TAL1	56
TFAP4	56
ETV3	56
FEV	55
Tcf7	55
TP63	54
STAT1::STAT2	54
ZEB1	54
USF2	51
NKX3-2	50
HNF4G	49
FLI1	49
Pou5f1::Sox2	49
JUNB	48
E2F1	48
HEY1	48
RELA	48
MAF::NFE2	46
Nfe2l2	46
KLF5	45
NFE2	44
Foxj2	42
EBF1	42
Dux	42
Tcf21	41
Foxo1	38
MAFG	38
BHLHE40	38
REL	37
MEF2B	37
MAFF	37
CREB1	36
SPIB	36
ZNF740	36
TFAP2A-var.2	35
ZNF263	35
Arid3a	35
DUX4	35
TFAP2C	35
ATF4	35
NFIA	34
ELK3	34
Mecom	33
HNF1B	33
BHLHE41	33
TFDP1	33
NR3C2	32
Srebf1(var.2)	31
Nkx3-1	31
HSF1	31
NEUROD1	30
FOXP1	29
MYBL2	27
PDX1	27
E2F6	27
NR4A2	26
Mafb	25
EGR1	25
IRF1	25
Vdr	24
MEF2A	24
CEBPD	23
EGR2	23
Nr1h3::Rxra	22
STAT1	21
NRF1	20
RUNX2	20
NFKB2	19
TP73	19
NFATC3	19
HOXA13	19
PRDM1	18
NFATC1	18
Klf1	18
Stat5a::Stat5b	17
Arnt	17
Atf1	17
NFYA	17
BARX1	16
KLF9	16
Ddit3::Cebpa	16
POU2F2	16
EOMES	16
THAP1	16
MYB	15
RARA::RXRA	15
TFAP2A-var.3	15
Gfi1b	15
PAX5	15
NFYB	13
Hand1::Tcf3	13
SMAD2::SMAD3::SMAD4	13
Bach1::Mafk	13
TEAD2	13
ETV4	12
Gmeb1	12
NFIL3	12
ZNF143	12
ARNT::HIF1A	12
TP53	11
Bcl6	11
SCRT1	11
SP3	11
Ahr::Arnt	11
HNF1A	11
SRF	11
E2F3	10
TBX1	9
RXRG	9
GRHL1	9
RXRB	8
ELF5	8
XBP1	8
NR2C2	8
Alx4	7
SP2	7
BATF3	7
NR3C1	7
BCL6B	7
MAFG::NFE2L1	6
CREB3	6
CREB3L1	6
SREBF1	6
Hic1;	5
FOXO4	5
FOXH1	4
Ascl2	4
HINFP	4
EGR4	4
FOXP3	4
Arx	3
FOS::JUNB	3
REST	3
RXRA::VDR	3
RFX5	3
Arntl	3
IRF2	3
SREBF2	3
ZBTB18	2
GLI2	2
GMEB2	2
SNAI2	2
MEF2D	2
Sox17	2
KLF13	1
Rarb	1
HOXA5	1
Rarg	1
TFE3	1
EGR3	1
MEIS1	1
FOSB::JUN	1
PPARG	1
SMAD3	1
Tcfl5	1
Pitx1	1
Nr5a2	1
TBX19	1
HSF2	1
SP4	1
ESR1	1