NAIK Genome Database

experiment name	hs_ColonAdenocarcinoma_LoVo_undef_RFX1_SRX335188	number of peaks	13360
antibody	RFX1	link to motif view if antibody and consensus motif is the same
cell line	LOVO	Number of reads	14177709
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Overlapping motifs:

Motif name	Number of overlap
ERG	299
ELF1	276
MYCN	263
Gabpa	258
MYC	252
SP1	244
E2F1	240
ELK1	228
ZBTB7A	224
E2F4	212
ETS1	197
NR2F1	191
Esrrg	182
TFDP1	174
TAL1::TCF3	173
ZNF740	167
TCF4	159
ZEB1	157
Tcf12	149
MAX	143
YY1	141
EGR1	139
HEY1	138
TCF3	134
ETV1	131
MYBL1	131
KLF5	130
NRF1	129
KLF4	128
TFAP2A	128
ELK4	125
NFIC	120
STAT3	117
TFAP2A-var.2	115
ELF3	114
FOS	113
EGR2	110
MAX::MYC	106
TFAP2C	105
Sox2	104
ZNF263	102
Hnf4a	98
CTCF	97
ETV3	94
FOXA1	93
ERF	91
ELK3	90
RUNX1	89
E2F6	88
SOX9	83
ETV6	82
BATF::JUN	82
JUND	81
BHLHE41	79
FOSL2	78
FEV	78
NFKB1	76
GATA3	76
BHLHE40	75
STAT1::STAT2	74
SP3	73
Foxa2	72
PBX1	70
Rxra	70
Gata1	69
Esrra	69
RELA	69
FOSL1	67
TEAD4	67
Atf3	66
JUN	66
REL	65
FOS::JUN	64
Pparg::Rxra	61
Ar	61
GATA2	61
OTX2	60
USF2	60
Gata4	59
USF1	58
SPI1	58
NFYA	58
GATA5	57
KLF9	57
FLI1	56
Klf1	55
NR1H2::RXRA	55
Atf1	53
RUNX3	52
NFYB	49
CREB1	48
EBF1	47
Tcf21	46
E2F3	46
TFAP4	45
TEAD1	45
NFATC3	44
SP2	42
CEBPB	42
NR4A2	41
TFAP2A-var.3	41
Gmeb1	41
CDX2	40
NFKB2	40
Hand1::Tcf3	40
Arnt	39
Nfe2l2	35
NEUROD1	35
TCF7L2	34
PAX5	34
NFE2	34
POU5F1B	33
CEBPA	32
JUNB	31
CEBPD	31
HNF4G	31
THAP1	31
MAF::NFE2	31
SP4	30
SPIB	30
NFIA	28
GMEB2	28
ARNT::HIF1A	27
Foxj2	26
SMAD2::SMAD3::SMAD4	26
BATF3	25
Tcf7	25
RFX5	25
STAT1	24
Arntl	23
TP63	22
PRDM1	22
XBP1	22
MAFG	21
MYB	21
NKX3-2	20
CREB3L1	20
Mafb	20
GATA1::TAL1	20
MAFK	20
Bach1::Mafk	20
Rfx1	19
MAFF	19
HNF1B	18
HSF1	18
ETV4	18
FOXP1	17
SNAI2	17
Ahr::Arnt	16
RUNX2	16
HINFP	16
Foxo1	15
Pou5f1::Sox2	14
KLF13	14
ZNF143	14
RARA::RXRA	14
NR3C2	14
NFIL3	14
Stat5a::Stat5b	14
TP73	13
Gfi1b	12
Rarb	12
SREBF2	12
Hic1;	12
PDX1	12
MYBL2	12
Nr1h3::Rxra	12
RXRB	11
Ddit3::Cebpa	11
RXRG	11
Mecom	11
Nkx3-1	11
ZBTB33	9
EGR4	9
RFX2	9
EOMES	9
SCRT1	9
HNF1A	9
NR2C2	8
NFATC1	8
CREB3	8
GLI2	8
ATF4	8
POU2F2	7
EGR3	7
GRHL1	7
Vdr	7
ELF5	7
Bcl6	7
Arid3a	7
TEAD2	7
BARX1	7
FOXP3	7
BCL6B	6
MEF2B	6
TBX1	6
MEF2A	6
IRF1	6
Rarg	5
Dux	5
REST	5
CLOCK	5
FOXH1	5
ZBTB18	5
HOXA13	4
Id2	4
Srebf1(var.2)	4
SRF	4
MEF2D	4
Ascl2	4
TP53	4
Sox17	3
SREBF1	3
MAFG::NFE2L1	2
Tcfl5	2
PPARG	2
TBX19	2
SMAD3	1
Arx	1
HOXA5	1
HSF2	1
MTF1	1
NFAT5	1
LEF1	1
Stat6	1
Hoxa11	1
E2F2	1
Pitx1	1
RORA	1
IRF2	1
DBP	1
RXRA::VDR	1
NR3C1	1
LMX1B	1
PROX1	1
Creb3l2	1
HES5	1
RORA(var.2)	1
FOXO4	1
NKX2-3	1
DUX4	1
FOS::JUND	1