NAIK Genome Database

experiment name	hs_ColonAdenocarcinoma_LoVo_undef_RAD21_SRX335186	number of peaks	95733
antibody	RAD21
cell line	LOVO	Number of reads	49978494
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	27328
MYC	7901
MYCN	6948
SP1	5928
Tcf12	5311
FOS	4830
TCF4	4447
NR2F1	4173
NFIC	4090
TAL1::TCF3	3847
FOXA1	3799
ZEB1	3774
FOSL2	3772
BATF::JUN	3726
JUND	3706
ERG	3593
Hnf4a	3574
ELF1	3396
Gabpa	3364
FOSL1	3280
MAX	3152
JUN	3117
TCF3	3080
FOS::JUN	2976
Foxa2	2919
Atf3	2876
Sox2	2845
ZBTB7A	2744
Esrrg	2732
ZNF740	2696
E2F4	2668
STAT3	2603
E2F1	2588
MYBL1	2535
RUNX1	2478
GATA3	2475
KLF4	2323
KLF5	2256
PBX1	2181
TFAP2C	2170
TEAD4	2105
ELK1	2078
EGR1	2055
NR1H2::RXRA	2039
Gata4	2019
RUNX3	2005
Rxra	1996
TFAP2A	1987
MAX::MYC	1948
EGR2	1882
Gata1	1851
YY1	1761
GATA5	1736
Pparg::Rxra	1714
TFAP2A-var.2	1691
Ar	1665
USF2	1604
USF1	1577
ETS1	1479
CEBPB	1440
BHLHE41	1433
CDX2	1401
Esrra	1389
GATA2	1388
TEAD1	1341
HNF4G	1340
ELF3	1336
BHLHE40	1249
TFAP4	1232
ZNF263	1171
JUNB	1131
SOX9	1116
NRF1	1093
NFKB1	995
NEUROD1	983
Arid3a	981
ETV1	980
Klf1	966
E2F6	959
NFE2	957
NFIA	931
CEBPA	909
OTX2	876
Nfe2l2	869
SPI1	861
CREB1	848
Tcf21	836
ELK4	824
TCF7L2	823
EBF1	819
STAT1::STAT2	811
CEBPD	787
FLI1	779
Tcf7	759
KLF9	759
NKX3-2	758
Foxj2	749
PAX5	739
HEY1	738
Nr1h3::Rxra	727
ERF	724
TFAP2A-var.3	723
Atf1	719
ETV3	707
ETV6	682
MAFF	666
MAFK	661
MAF::NFE2	653
TP63	638
Arnt	633
SP3	627
THAP1	613
TFDP1	605
POU5F1B	601
E2F3	583
RELA	577
REL	567
MAFG	567
ELK3	566
SMAD2::SMAD3::SMAD4	565
SP4	517
MYBL2	506
Foxo1	504
FOXP1	495
Bach1::Mafk	488
Mafb	486
ARNT::HIF1A	468
PDX1	447
GATA1::TAL1	437
RUNX2	399
Pou5f1::Sox2	399
BATF3	388
Hand1::Tcf3	384
NFKB2	378
EOMES	377
XBP1	331
Nkx3-1	326
RARA::RXRA	323
HNF1B	323
STAT1	322
NR3C2	305
TEAD2	304
SP2	300
NFYB	298
EGR4	294
Vdr	292
HSF1	291
FEV	276
MEF2B	268
Ahr::Arnt	260
NFATC3	260
NFIL3	253
ATF4	252
NFYA	242
MYB	239
ZNF143	223
RXRB	222
BCL6B	220
PRDM1	219
SNAI2	216
Mecom	216
Stat5a::Stat5b	214
RXRG	205
REST	203
MEF2A	201
TP53	199
GMEB2	192
IRF1	187
Arntl	184
KLF13	184
Bcl6	179
NR4A2	178
Ddit3::Cebpa	176
Gfi1b	173
SCRT1	162
GRHL1	152
EGR3	146
SRF	144
ETV4	142
HINFP	140
HNF1A	138
TBX1	132
TP73	130
SPIB	129
Hic1;	121
Gmeb1	120
POU2F2	116
FOXP3	116
NFATC1	111
MAFG::NFE2L1	111
Dux	107
FOXH1	102
ZBTB18	102
NR2C2	100
SREBF2	93
Sox17	89
SREBF1	89
ELF5	88
RFX5	83
CREB3L1	82
DUX4	72
NR3C1	71
Ascl2	67
ZBTB33	58
PPARG	57
Srebf1(var.2)	55
Rarb	52
CLOCK	50
RXRA::VDR	49
CREB3	48
BARX1	46
Rarg	45
MEIS1	45
RORA(var.2)	38
GLI2	38
HOXA13	35
MEF2D	35
TBX19	34
FOS::JUND	33
FOS::JUNB	31
Pax6	31
PROX1	23
RARA	22
Nr5a2	22
FOXO4	19
LEF1	19
Creb3l2	17
Hes1	16
RORA	14
NFIC::TLX1	13
Rfx1	12
RFX2	12
TFE3	12
Arx	11
SMAD3	11
Pitx1	9
Hoxa9	8
Id2	7
MIXL1	7
NFAT5	6
Klf12	5
Hoxa11	5
E2F8	5
DBP	5
Alx4	5
IRF2	5
HOXA5	5
SOX4	4
FOS::JUN(var.2)	4
TFEB	4
HSF2	3
Sox1	3
ATF7	3
Tcfl5	3
HES5	2
FOSB::JUN	2
Nkx2-5-var.2	2
ISX	2
Stat6	1
POU3F2	1
NKX2-3	1
NKX2-8	1
E2F2	1

Motif name

Number of overlap

27328

7901

6948

5928

5311