NAIK Genome Database

experiment name	hs_ColonAdenocarcinoma_LoVo_undef_MED1_SRX335165	number of peaks	15652
antibody	MED1
cell line	LOVO	Number of reads	22012121
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
SP1	1496
E2F1	1177
ERG	1060
NRF1	1046
E2F4	1009
ELK1	967
ELF1	926
Gabpa	861
ZNF740	856
KLF5	813
ZBTB7A	773
FOS	747
MYCN	716
MYC	704
ETS1	682
NR2F1	665
EGR1	656
Esrrg	650
BATF::JUN	635
Hnf4a	615
FOSL2	566
JUND	561
EGR2	558
GATA3	533
KLF4	530
ELK4	529
JUN	524
FOXA1	516
FOSL1	511
TAL1::TCF3	506
Tcf12	505
MYBL1	502
TCF4	501
STAT3	496
NFIC	491
ZEB1	491
ETV1	487
TFDP1	482
FOS::JUN	477
Sox2	476
CTCF	461
TFAP2A	457
Atf3	455
MAX	446
TFAP2C	439
TFAP2A-var.2	423
GATA5	416
SP3	411
TCF3	407
Gata4	405
Foxa2	394
SOX9	392
Rxra	376
ELK3	373
NR1H2::RXRA	360
PBX1	360
YY1	353
Klf1	348
ERF	341
Pparg::Rxra	332
Gata1	329
RUNX1	317
E2F6	312
ELF3	301
GATA2	300
CDX2	297
Esrra	297
ETV3	290
TEAD4	288
ETV6	286
HEY1	285
SP2	284
Ar	275
BHLHE40	275
SP4	256
MAX::MYC	247
USF2	245
KLF9	237
BHLHE41	235
Atf1	229
ZNF263	223
NFYA	222
FLI1	222
TEAD1	218
STAT1::STAT2	217
HNF4G	216
NFYB	216
E2F3	212
USF1	206
CREB1	205
TFAP2A-var.3	196
NFKB1	191
JUNB	190
NFIA	189
SPI1	185
TCF7L2	182
CEBPB	182
RUNX3	179
FEV	174
Tcf7	162
RELA	162
THAP1	160
EBF1	155
Tcf21	155
REL	152
NFE2	149
CEBPA	148
PAX5	145
NFATC3	143
Nfe2l2	143
Arnt	140
OTX2	130
CEBPD	128
TP63	126
XBP1	124
TFAP4	123
MAF::NFE2	119
GMEB2	118
POU5F1B	118
NKX3-2	115
NR4A2	113
MAFF	111
Foxj2	110
NEUROD1	109
EGR4	103
NFKB2	100
MAFG	99
BATF3	99
FOXP1	99
SMAD2::SMAD3::SMAD4	98
STAT1	95
GATA1::TAL1	92
MYB	87
RUNX2	85
MYBL2	84
ARNT::HIF1A	84
MAFK	83
Mecom	82
Hand1::Tcf3	81
Foxo1	78
Gmeb1	77
ETV4	77
RXRB	77
Nr1h3::Rxra	72
Bach1::Mafk	72
NR3C2	72
Ahr::Arnt	72
RXRG	71
RARA::RXRA	69
Arid3a	68
HNF1B	66
PDX1	66
Stat5a::Stat5b	65
ZNF143	65
SNAI2	64
ZBTB33	64
Mafb	60
HSF1	59
Arntl	59
KLF13	57
Vdr	55
SPIB	55
EGR3	54
Nkx3-1	50
Hic1;	48
ATF4	47
TP73	46
NFIL3	45
TEAD2	43
MEF2B	43
IRF1	41
PRDM1	41
Pou5f1::Sox2	41
CREB3L1	40
HINFP	39
HNF1A	38
Gfi1b	38
SREBF2	38
NR2C2	36
Rarg	33
Ddit3::Cebpa	32
SREBF1	32
BCL6B	31
EOMES	30
BARX1	29
HOXA13	29
TBX1	29
Bcl6	26
GRHL1	26
NFATC1	25
CREB3	25
TP53	24
Sox17	24
SCRT1	22
Ascl2	22
FOXH1	21
CLOCK	21
Rarb	20
SRF	19
MEF2A	19
POU2F2	19
Srebf1(var.2)	18
MAFG::NFE2L1	18
ELF5	18
NR3C1	18
FOXP3	18
RFX5	17
REST	16
FOXO4	16
GLI2	16
LEF1	15
RORA(var.2)	15
Dux	14
MEF2D	12
PROX1	9
RORA	9
PPARG	9
RXRA::VDR	9
Creb3l2	8
Hes1	8
ZBTB18	7
DUX4	6
MEIS1	6
HSF2	6
Id2	6
Pitx1	6
Arx	6
Rfx1	6
HOXA5	5
FOS::JUND	5
Pax6	5
Hoxa11	4
DBP	4
SMAD3	4
Nr5a2	3
RFX2	3
FOS::JUNB	3
Nkx2-5-var.2	3
NFAT5	3
E2F8	2
TFE3	2
TBX19	2
MIXL1	2
Sox1	1
SREBF2(var.2)	1
E2F2	1
LMX1B	1
TFEB	1
HES5	1
MTF1	1
Alx4	1
IRF9	1
FOSB::JUN	1
ATF7	1
POU3F2	1
IRF2	1
RARA	1
NKX2-3	1
FOS::JUN(var.2)	1

Motif name

Number of overlap

1496

1177

1060

1046

1009