Information for 4-WCAKGCAACTTGG (Motif 7)

C G A T A G T C C G T A A C T G A C T G A T G C C G T A C G T A A T G C A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A A T C G A C G T A C G T A T C G A G T C G T A C C G A T A C T G G C T A
p-value:1e-13
log p-value:-3.086e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.2 +/- 23.4bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:WCAKGCAACTTGG
-AAGGCAAGTGT-
 C G A T A G T C C G T A A C T G A C T G A T G C C G T A C G T A A T G C A C G T A C G T A C T G A C T G
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:WCAKGCAACTTGG
ATATGCAAATNNN
 C G A T A G T C C G T A A C T G A C T G A T G C C G T A C G T A A T G C A C G T A C G T A C T G A C T G
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--WCAKGCAACTTGG
TBGCACGCAA-----
 A C G T A C G T C G A T A G T C C G T A A C T G A C T G A T G C C G T A C G T A A T G C A C G T A C G T A C T G A C T G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:WCAKGCAACTTGG
TTATGCAAAT---
 C G A T A G T C C G T A A C T G A C T G A T G C C G T A C G T A A T G C A C G T A C G T A C T G A C T G
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:WCAKGCAACTTGG
ATATGCAAAT---
 C G A T A G T C C G T A A C T G A C T G A T G C C G T A C G T A A T G C A C G T A C G T A C T G A C T G
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:WCAKGCAACTTGG---
ACATGCTACCTAATAC
 C G A T A G T C C G T A A C T G A C T G A T G C C G T A C G T A A T G C A C G T A C G T A C T G A C T G A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:WCAKGCAACTTGG----
-----CAAGATGGCGGC
 C G A T A G T C C G T A A C T G A C T G A T G C C G T A C G T A A T G C A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Pou2f3/MA0627.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--WCAKGCAACTTGG-
TTGTATGCAAATTAGA
 A C G T A C G T C G A T A G T C C G T A A C T G A C T G A T G C C G T A C G T A A T G C A C G T A C G T A C T G A C T G A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--WCAKGCAACTTGG-
TTGTATGCAAATTAGA
 A C G T A C G T C G A T A G T C C G T A A C T G A C T G A T G C C G T A C G T A A T G C A C G T A C G T A C T G A C T G A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--WCAKGCAACTTGG-
TTGTATGCAAATTAGA
 A C G T A C G T C G A T A G T C C G T A A C T G A C T G A T G C C G T A C G T A A T G C A C G T A C G T A C T G A C T G A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A