Information for 2-CAGGHAGAACAGA (Motif 3)

T A G C C G T A C A T G C T A G G T A C C G T A T C A G C G T A C T G A T G A C C G T A C T A G T C G A
Reverse Opposite:
A G C T G A T C C G A T A C T G G A C T G A C T A G T C G C A T C A T G G A T C G T A C C G A T A T C G
p-value:1e-17
log p-value:-4.023e+01
Information Content per bp:1.583
Number of Target Sequences with motif133.0
Percentage of Target Sequences with motif16.04%
Number of Background Sequences with motif3370.4
Percentage of Background Sequences with motif7.15%
Average Position of motif in Targets53.0 +/- 24.9bp
Average Position of motif in Background50.3 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAGGHAGAACAGA
ACAGGAAGTG----
 A C G T T A G C C G T A C A T G C T A G G T A C C G T A T C A G C G T A C T G A T G A C C G T A C T A G T C G A
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGGHAGAACAGA
NDCAGGAARTNN---
 A C G T A C G T T A G C C G T A C A T G C T A G G T A C C G T A T C A G C G T A C T G A T G A C C G T A C T A G T C G A
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGGHAGAACAGA
CACAGN---------
 A C G T A C G T T A G C C G T A C A T G C T A G G T A C C G T A T C A G C G T A C T G A T G A C C G T A C T A G T C G A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGGHAGAACAGA
AACAGGAAGT-----
 A C G T A C G T T A G C C G T A C A T G C T A G G T A C C G T A T C A G C G T A C T G A T G A C C G T A C T A G T C G A
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGGHAGAACAGA
NACAGGAAAT-----
 A C G T A C G T T A G C C G T A C A T G C T A G G T A C C G T A T C A G C G T A C T G A T G A C C G T A C T A G T C G A
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAGGHAGAACAGA
VCAGGTRDRY----
 A C G T T A G C C G T A C A T G C T A G G T A C C G T A T C A G C G T A C T G A T G A C C G T A C T A G T C G A
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CAGGHAGAACAGA
NACAGGAAAT-----
 A C G T A C G T T A G C C G T A C A T G C T A G G T A C C G T A T C A G C G T A C T G A T G A C C G T A C T A G T C G A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAGGHAGAACAGA
CCAGGAACAG----
 A C G T T A G C C G T A C A T G C T A G G T A C C G T A T C A G C G T A C T G A T G A C C G T A C T A G T C G A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAGGHAGAACAGA
AVCAGGAAGT-----
 A C G T A C G T T A G C C G T A C A T G C T A G G T A C C G T A T C A G C G T A C T G A T G A C C G T A C T A G T C G A
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAGGHAGAACAGA
ANCAGGAAGT-----
 A C G T A C G T T A G C C G T A C A T G C T A G G T A C C G T A T C A G C G T A C T G A T G A C C G T A C T A G T C G A
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T